Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpet_0747 |
Symbol | |
ID | 5170085 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga petrophila RKU-1 |
Kingdom | Bacteria |
Replicon accession | NC_009486 |
Strand | - |
Start bp | 755472 |
End bp | 757682 |
Gene Length | 2211 bp |
Protein Length | 736 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640563265 |
Product | primosomal protein N' |
Protein accession | YP_001244342 |
Protein GI | 148269882 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1198] Primosomal protein N' (replication factor Y) - superfamily II helicase |
TIGRFAM ID | [TIGR00595] primosomal protein N' |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00195838 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTACTACA AGGTGGCTGT CTCCGGTTCG GGAAAAGTGC TTAATGTTTT CTCTTCAGAA GAGCTTTTGA CTGGTGAAAG AGTGTGGTTG AAGTGGCGAA ATGAAAAAGT CAAGGGCTAC GTACTGGAAC GATCATTTTC ACACGAAAAC GAAGCAACGC TCAGTGAAAG GGACGGTAAA AGTTTTCTAA GCGAAGGACA TGTGAAAATA GCAGAATGGG TGTCTGAAAG GTTTTTCTCA CCTGTAGGAA TGGTTTTCGA TCTGTTTTTC CCACAGGGTA TCGACGATTA CAAGGAGGAA GTGGTTGTTT CGGAGAGTCC GTTTCTGGAT TTCGACAGGA TGACTCTGCG CGATTTTCTT GAAACTTTCG GGGAAAAAGC TCTGAAAGAA ATGGTGAAAA AAGGCCTGGT GAGGGTGGAG AAAAATTTCT ATGTGAAAGA GCCAAGACCT CGTGTGAAAA AACGATTGTT TCTGAAAAAG GGAATAAGTG AAATCGTTCG AGAACATCTA ACTGTGAAGC AGAGAATGGT GGTGGAATAC CTTCAATTCA ACGATGGGGT CCCTCTTGAG GAGCTGCTGG AGGATCTGGA GGTTTCAAAG AGTGTGATTG AAACTCTTCA AAGGAAGAAT ATAGTAGAAA TAGTGAGTGG TGACGTTCTT CCAAAAAAGA GAAGGATCCT TCGCGGTGAT TTCAAAGGAA ATATCTCGAA GGAAAATCTT TTTTTTGGTC CTACTGGAAG TGGAAAAACC GAGGCTTTGT TCGAGTTGAT CGATGTGTAT TCGAGGAAAG GAACTGTGCT TTTCCTCGTA CCGGAAGTTT CTGTTCTCAC CCACACGCTT TCACGTCTGA AGGGAGCCTT CCCGGACTTG AAAATAGGGA TTTATCACAG CTACCTTTCC AGAGCGAGGA AAAATCTGGA ATGGTACAGG GCGGTTAGCG GAAAAATCGA TGTGCTTTTG GGAACACGCA GTGCTGTTTT TGTTCCAGTT AAGAATCTTT CCCTCTTGAT AGTCGACGAA GAACACGATG AGAGTTTTTA TCAACACACT CGACCTTCTT ACGATGCCAT CGTGGTTGCA AGGAAAATCT CTGAAGTTTT CGATGTTCCC ATAATTCTGT CTTCTGCAAC ACCGGATTTG TGGACCTACA GAGAGGCAAA AGAGGGTCGC ATCAGGACGT TCAATTTTAC GAGAAGGTTC GGGAGTTTGT CTGTGGAAGT TGTCGATATG CGAAATGAAG AGAAGATAGG AAGTTTTGCG AAAAAGACCC TTGACAGAAT AGAGGAGACC CTCGAGGAAG GCAAGAGAGT TCTCATCTAC GTAAGGAGAA AAGGTTTCTG GGGTCGTGTC CAGTGTGAAG TGTGTGGGTA CGTGCTCAAA TGTGAGAATT GTGATGTGTC TCTGGTGTAC CATTCAGATA CGCATTCCTT GAAATGTCAT CAATGTGGGC GTGAGTACGG ATTGGTTGAA TCCTGTCCTC GCTGTGGAGG GCGTCTCGTC GGAAGAACAG CGGGAACAGA AAGAGTGGAA AGGGAACTGA AAAGGTACTT TCCGACTCGC AGGATAGCGA GAGTCGATAG AGAGGTTGTC GATAACATCA TGGAGCTGGA AAGTTACATA GACAAATTGA TCAGAGGCGA GATAGATATA CTCGTTGGAA CCAGGTTGAT CACAAAGAGT CTCAGTGTAC CCGAAATAGG TCTCGTATGT ATCATGGATG TGGATTCTTT GATCTTCAAC CCTGATTATT CGTCTTCGCT TCGTACGTTT CAGTTGGTCG TTCAGGCACT TGGGAGAGCA TCAAGAGGAG ATCAGGGGAA GGCGATTATC CAGACTTACA ACCCGGAGGA CACGATCATC AGAAAAGCTC TGGAAGAAGA TGTGAACGGT TTTTATGCCG AGGAACTCGA AAGAAGAAAA GCCCTTGGTT ATCCTCCATA TCGTCACCTC ATTCAGGTTG CTGTGAAGTC CAAGAATCCG GAAGTTGGAA AGAATTCTCT GACTTCTCTA AAAGAATTTC TGAAAGGCGA GGAGGTTCTT GGACCCGTTG AGCACTGGGT TTTCAAACTG AGAGGATTCT ACAGGCACCA TCTCATTGTG AAAACAGAAG ACTTGGAGAG AGTACTTCCA AAACTGGAAA AAGCGTTGAG AATACTGGGA ATCGATGCGA TTGTTCGGGT CGATCCACCC ACGCTCGAGG TATCAGATTA A
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Protein sequence | MYYKVAVSGS GKVLNVFSSE ELLTGERVWL KWRNEKVKGY VLERSFSHEN EATLSERDGK SFLSEGHVKI AEWVSERFFS PVGMVFDLFF PQGIDDYKEE VVVSESPFLD FDRMTLRDFL ETFGEKALKE MVKKGLVRVE KNFYVKEPRP RVKKRLFLKK GISEIVREHL TVKQRMVVEY LQFNDGVPLE ELLEDLEVSK SVIETLQRKN IVEIVSGDVL PKKRRILRGD FKGNISKENL FFGPTGSGKT EALFELIDVY SRKGTVLFLV PEVSVLTHTL SRLKGAFPDL KIGIYHSYLS RARKNLEWYR AVSGKIDVLL GTRSAVFVPV KNLSLLIVDE EHDESFYQHT RPSYDAIVVA RKISEVFDVP IILSSATPDL WTYREAKEGR IRTFNFTRRF GSLSVEVVDM RNEEKIGSFA KKTLDRIEET LEEGKRVLIY VRRKGFWGRV QCEVCGYVLK CENCDVSLVY HSDTHSLKCH QCGREYGLVE SCPRCGGRLV GRTAGTERVE RELKRYFPTR RIARVDREVV DNIMELESYI DKLIRGEIDI LVGTRLITKS LSVPEIGLVC IMDVDSLIFN PDYSSSLRTF QLVVQALGRA SRGDQGKAII QTYNPEDTII RKALEEDVNG FYAEELERRK ALGYPPYRHL IQVAVKSKNP EVGKNSLTSL KEFLKGEEVL GPVEHWVFKL RGFYRHHLIV KTEDLERVLP KLEKALRILG IDAIVRVDPP TLEVSD
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