| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_0746 |
|---|
| Symbol | |
|---|
| ID | 5170074 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermotoga petrophila RKU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009486 |
|---|
| Strand | - |
|---|
| Start bp | 750701 |
|---|
| End bp | 751198 |
|---|
| Gene Length | 498 bp |
|---|
| Protein Length | 165 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 640563261 |
|---|
| Product | homing endonuclease, LAGLIDADG/HNH |
|---|
| Protein accession | YP_001244341 |
|---|
| Protein GI | 148269881 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGAAATCT TGGATCTCAA ACCTGATTGG GTTGTTGGAT TCGTCGATGG TGAAGGCTGT
TTCTATGTGG GTGTTAATAG AAATCGCACC ATGAAAACAG GTTACCAGGT TCTCCCTGAA
TTCAGGATCG TTCAACATGA AAGAGATATA CAGGTTTTGT ACGCATTGAG GAAGTTTTTC
GGATGCGGTG TTGTTCGAAG AAACCACGAT GATCGATACG AGCTTCGGAT CCGGAAGAGA
TCTTGCTTGA AAAAAGTAGT GGAGTTTTTC GAAAAACACC CTCTGAAAAC GAAGAAGAAC
GTCGACTTCA AGAAATTCAG AAGGATAATC CTGATGATGG AACGGGGAGA ACACCTGACG
AAAGAAGGTC TCATCAAGAT CCTGGAAATA GCCATGGAAA TAAACACAGG TAATCACGAG
AGACTACGAC GAGTCCTTGA AGAGATCCGG GGACTGGATG AAGATACAGT CCACCCCCAT
TCCGAAAGGA TGGGATAA
|
|---|
| Protein sequence | MEILDLKPDW VVGFVDGEGC FYVGVNRNRT MKTGYQVLPE FRIVQHERDI QVLYALRKFF
GCGVVRRNHD DRYELRIRKR SCLKKVVEFF EKHPLKTKKN VDFKKFRRII LMMERGEHLT
KEGLIKILEI AMEINTGNHE RLRRVLEEIR GLDEDTVHPH SERMG
|
|---|
| |