Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpet_0735 |
Symbol | |
ID | 5170914 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga petrophila RKU-1 |
Kingdom | Bacteria |
Replicon accession | NC_009486 |
Strand | - |
Start bp | 739578 |
End bp | 740654 |
Gene Length | 1077 bp |
Protein Length | 358 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640563248 |
Product | periplasmic binding protein |
Protein accession | YP_001244331 |
Protein GI | 148269871 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0000000243949 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATTCA AGGTTTTCAT CTCTGTTTTT CTGATTCTCT CGATCGTGTT GTTTTCGGAA GGAATTGTGA TAAAGGATCT TCTTGGAAGA GAAGTAGAAG TTCCTTCGAA CGTGAATCGA ATCGTGGCGG TGGGTCCCGG GGCGCTCAGG TTGATTGCGT ATTTGAAAGC CACCGATATG GTTGTCGGTG TGGAAGACTT TGAGAAACTC AGACCTTACG GGAGGCCTTA CATAGTTGCG TATCCGGAGC TCAAGGAACT TCCGAGTGTT GGCCCTGGAG GACCAGGAAA GCTTCCAAAT CTGGAGTCTT TGATAACTCT GCAACCCGAC GTTGTCTTTA TAACGTACGT TGACAGAAAG ACGGCGCAGG ACATACAGGA GAAAACGGGG ATTCCCGTTG TCGTACTCAG TTACGGAGAT CTCGGGACAT TTGAAGACGA GGATCTCTTC AGATCGCTCG AACTGGCGGG AAAGATTCTT GGAAGAGAAG AAAGAGCCCA TGAAGTGGTT GATTTCATAA AGAAAGCGCA GGAGGATCTC TCGACTCGAT CTGAGGCTGT CGAAAGTCCT ACTGTCTACG TTGGTGGAAT CGGATACAAA GGAGTTCATG GAATCGATAG CACGGAGGCG AAGTATCCTC CTTTCGTGGT CCTACACGCG AGGAACGTTG TGCACGGGTT GGGAGAAGGA CACAAATTCA TAGATCCTGA GAAGCTACTC GTTTGGGATC CAGAGTACAT TTTCATCGAT GAAAACGGTT TGAGCCTCGT ACTGGACGAT TATTCGAAAC ACAGAGAGTT CTATGAGAGT TTAAACGCTG TTAAAAGAGG GAAAGTCTAC GGCATTCTCC CTTACAATTA CTACACCACC AACATCGGAA CGGCTCTGGC CAATGCGTAC TTCATCGGAA AAGTCCTCTA TCCCGAACGT TTTGCCGATA TCGATCCGGA GGAAAAGGCG GATGAAATTT ATGAATTCCT TCTCGGAAAA AGGGTTTACG AGGAGATGGC TGAGCAATTT GGAGGATTTG GAAAGATAGA TCTTTCTTCA GGAAAGATCC TCCGTGGAAC ATGGTGA
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Protein sequence | MKFKVFISVF LILSIVLFSE GIVIKDLLGR EVEVPSNVNR IVAVGPGALR LIAYLKATDM VVGVEDFEKL RPYGRPYIVA YPELKELPSV GPGGPGKLPN LESLITLQPD VVFITYVDRK TAQDIQEKTG IPVVVLSYGD LGTFEDEDLF RSLELAGKIL GREERAHEVV DFIKKAQEDL STRSEAVESP TVYVGGIGYK GVHGIDSTEA KYPPFVVLHA RNVVHGLGEG HKFIDPEKLL VWDPEYIFID ENGLSLVLDD YSKHREFYES LNAVKRGKVY GILPYNYYTT NIGTALANAY FIGKVLYPER FADIDPEEKA DEIYEFLLGK RVYEEMAEQF GGFGKIDLSS GKILRGTW
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