| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_0731 |
|---|
| Symbol | |
|---|
| ID | 5170792 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermotoga petrophila RKU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009486 |
|---|
| Strand | + |
|---|
| Start bp | 736171 |
|---|
| End bp | 736959 |
|---|
| Gene Length | 789 bp |
|---|
| Protein Length | 262 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640563240 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001244327 |
|---|
| Protein GI | 148269867 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0390] ABC-type uncharacterized transport system, permease component |
|---|
| TIGRFAM ID | [TIGR00245] conserved hypothetical protein TIGR00245 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.000000000207096 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGACCAG TTGATATCGG CCTGATACAG CTTTTGAGCG CCTACATTTT CGTTGTGATT
CTGATGTTCA TATTGAGAAT AAGAAGGATA CCGCGGGAAA AAGAAGTTCT GGTGGCATCC
ATCAGGATGA CTTTCCAGCT GGTGCTGGCA GGATTTGTAC TGAGTTACAT ACTCGATCAT
CCTTCACCTC TCTACACAGT TCTGGCAGTT CTCGTTATGG AGATATTCGC CATCTACAAC
GTTTACAAAA GGGCAAGGCT TTCTCTTCCA TCGAAGGTGA AAAAACGTCT GGAGTTCTTC
ATAGCGATCT CTGTGAGTAC GGGAACGCTT CTCAGCCTTG TGTACTTTCT GTATGTGGTA
GTCAGGATCT CTCCCTGGTT CGATCCGAGG TACGTGATCC CTCTTGCGGG TATGATCATC
GGAAACTCCA TGACCGGTGT TTCACTAGGA GTGAAGACAC TCTCTGAGTC AATAACAATT
CAAAAAGATA TTGTGGAAGC CGCTTTGATG CTGGGGGCAA GGCCAAAAGA CGCTGTGAGA
ATGTTCAGTG ACAGGGCGTT CGATTCGGCG ATACTGCCAA CTCTCAACTC CATGATTGGC
ATGGGTATCG TGTTTCTCCC AGGCATGATG ACGGGACAGA TCCTCTCTGG AGCTTCTCCG
ATCACTGCGA TAAAGTATCA GATCGCAATA ATGCTTGGAA TACTCGGTGG AGTCACGATC
AGTGTGAGTG TGTTTCTCTA TCTGGGATAC AAAGCTTTCT TCAACAGAGA AGATCAGCTG
ATCGTTTAA
|
|---|
| Protein sequence | MGPVDIGLIQ LLSAYIFVVI LMFILRIRRI PREKEVLVAS IRMTFQLVLA GFVLSYILDH
PSPLYTVLAV LVMEIFAIYN VYKRARLSLP SKVKKRLEFF IAISVSTGTL LSLVYFLYVV
VRISPWFDPR YVIPLAGMII GNSMTGVSLG VKTLSESITI QKDIVEAALM LGARPKDAVR
MFSDRAFDSA ILPTLNSMIG MGIVFLPGMM TGQILSGASP ITAIKYQIAI MLGILGGVTI
SVSVFLYLGY KAFFNREDQL IV
|
|---|
| |