Gene Tpet_0730 details

Gene Information

• Locus tag: Tpet_0730
• ID: 5171739
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermotoga petrophila RKU-1
• Kingdom: Bacteria
• Replicon accession: NC_009486
• Strand: +
• Start bp: 735551
• End bp: 736171
• Gene Length: 621 bp
• Protein Length: 206 aa
• Translation table: 11
• GC content: 41%
• IMG OID: 640563239
• Product: ABC transporter related
• Protein accession: YP_001244326
• Protein GI: 148269866
• COG category: [V] Defense mechanisms
• COG ID: [COG1136] ABC-type antimicrobial peptide transport system, ATPase component

Plasmid Coverage information

• Num covering plasmid clones: 1
• Plasmid unclonability p-value: 0.00000000333967
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGTTTGTTT TAAAGAATGT GAAATACAAG GACATATTAA ACATTGAAGA ACTCCACATT 
CCGCCACGAA AAATTACCGT TATTACAGGA AAGAGCGGCA CAGGAAAAAC AACTCTTCTG 
AAGATGCTGA ACAAACTTAT TTCACCGGAT AGTGGAGAGA TTTTCTTCAA AGGCACACCA 
TTGAAAGAGA TCGATTCGGT TGAACTCAGA CGGAAAGTGG TGATGCTTCC TCAGTTTCCT 
GTTGTGTTTC CCGGAAACGT GAAGGAAAAT CTTATCTTAG GCTTGAAATT TTCTGGAAAA 
AAGATACCAC ACGATGAAGA GTTGAGAAAC ATCTTAAAGT TCGTTATGCT CGAAAAAGAC 
CTGAACGATG ATCCAGAAAA ATTCTCCGGA GGCGAAAAAC AGCGACTCGC TCTGGCAAGG 
GTTCTTCTCA TGGATCCTGA GGTGCTGCTC CTCGATGAAC CCACTTCCTC TCTGGACGAA 
AAAACCGGCA TTGAAATCAT CAAAAAAGTG TCTAACTTTG CAAAAAATCG GGAGAAAACG 
CTTGTCATAG TGACTCATAA CCCGGAATTG AAAAAATTCG CAGATGTGTT GATCGAACTC 
AAAAACGGGA GGGTTTTGTG A 

 

Protein sequence

MFVLKNVKYK DILNIEELHI PPRKITVITG KSGTGKTTLL KMLNKLISPD SGEIFFKGTP 
LKEIDSVELR RKVVMLPQFP VVFPGNVKEN LILGLKFSGK KIPHDEELRN ILKFVMLEKD 
LNDDPEKFSG GEKQRLALAR VLLMDPEVLL LDEPTSSLDE KTGIEIIKKV SNFAKNREKT 
LVIVTHNPEL KKFADVLIEL KNGRVL