| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_0725 |
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| Symbol | |
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| ID | 5170493 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | - |
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| Start bp | 729059 |
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| End bp | 730384 |
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| Gene Length | 1326 bp |
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| Protein Length | 441 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640563232 |
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| Product | DNA repair protein RadA |
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| Protein accession | YP_001244321 |
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| Protein GI | 148269861 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1066] Predicted ATP-dependent serine protease |
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| TIGRFAM ID | [TIGR00416] DNA repair protein RadA |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.573014 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAAAAGT TCGTCTGTTC CAACTGTGGC TACGTTTCTC CAAAATGGTT CGGAAGGTGC
CCTCAGTGCG GTGAATACGA TACAGCAGAA GAAGTGGTTC AAAGAAGGAA AAACAGGGAG
GGAAGCCCCT CCCTGTTTTT AAATTTAGAA GACGCTGGAG AAATTTCCCT TGAAAGGCTA
TCCACGGGTT TTTCAGAACT GGACAGGGCT TTCAGGGGAG GAATTGTTCC CGGACAGGTG
ATCCTGCTCT CCGGTGAACC CGGGATAGGA AAGAGTACGA TAGCGCTTCA GATCGCTGAA
AGGTTCGCTG AAAGGGGACT GGTTGTTTAC GTTTCTGGTG AAGAATCCCC CCAGCAGTTG
AAATTGAGAG CGGACAGGCT TTTGTTGAAG AGGAAAAAAA ACATCCTTTT GACCTTAGAG
AACGACATCG ATGAAATAAT ATCCTCTCTG AGAAATGAAA GAGTGAGTTT CATGGTGGTT
GACTCCATTC AAACGGTTTT TTCCTCAGAC CTTGGAAGCA GCCCCGGAAG TATCTCTCAG
GTGAAAAACG TGACGATGAA AACAATTGAC TTTGCAAAGA AAAGAGGTGT GCCGGTTCTC
TTAGTGGGAC ATGTGACGAA AGAGGGGGAA ATAGCAGGAC CGAAACTGGT GGAACACATG
GTGGACACTG TAGCATATTT TGAGGGAGAC AGGCGTACAG GATTGAGACT CTTGAAGATC
ACAAAGAACA GATTCGGACC TTCCGACGAA GTGGCGGTCT TTGAGCTCAA AGAAAACGGT
TTCGTCCAGG TGGAGAATCC TTCCTTTACT GAAGGAGATG CGGATCTTCC AGGAAACGTC
CTCACGTGTG TCTTTGAAGG CACAAAACCC TTTGTTGTAC AGATACAGGC ACTCGTCTCC
AAAAACAGAA CGTTTTCTCC CAAGAGGGTG TGTAAAGGTG TAGATGTGAA CAGGGTGATG
CTTCTGATTG CCGTGATCAG CAAATATCTG AGGCTTCCCA TAGAAACGCA CGACGTTTAT
GTCAACGTTG TGGGGGGACT CAGGATAACG GATCCTGCGG CGGATCTCGC GATAGCTCTT
TCCATTGTGT CTTCCTATCT GGAAGTTTCT CTACACGATA CGGCGGCCGT TGGTGAAATT
GGTTTGGATG GAAGGGTGAG AAAGGTTTAC AATATTAATA GAAGATTGAA CTCTTTGAAG
AATTCGGGGA GGATAATAGT TCCTCCGATC GAAGAAGAGC AAAAAGGAGT TTTTGAGGTG
CGTGACCTCA AAGAGGCCGT CTCTATAATT GGGGGTGAAA TCCTTGGTAC CCCAGGAGCT
GATTGA
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| Protein sequence | MKKFVCSNCG YVSPKWFGRC PQCGEYDTAE EVVQRRKNRE GSPSLFLNLE DAGEISLERL
STGFSELDRA FRGGIVPGQV ILLSGEPGIG KSTIALQIAE RFAERGLVVY VSGEESPQQL
KLRADRLLLK RKKNILLTLE NDIDEIISSL RNERVSFMVV DSIQTVFSSD LGSSPGSISQ
VKNVTMKTID FAKKRGVPVL LVGHVTKEGE IAGPKLVEHM VDTVAYFEGD RRTGLRLLKI
TKNRFGPSDE VAVFELKENG FVQVENPSFT EGDADLPGNV LTCVFEGTKP FVVQIQALVS
KNRTFSPKRV CKGVDVNRVM LLIAVISKYL RLPIETHDVY VNVVGGLRIT DPAADLAIAL
SIVSSYLEVS LHDTAAVGEI GLDGRVRKVY NINRRLNSLK NSGRIIVPPI EEEQKGVFEV
RDLKEAVSII GGEILGTPGA D
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