| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_0706 |
|---|
| Symbol | |
|---|
| ID | 5170647 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermotoga petrophila RKU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009486 |
|---|
| Strand | + |
|---|
| Start bp | 708826 |
|---|
| End bp | 710109 |
|---|
| Gene Length | 1284 bp |
|---|
| Protein Length | 427 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 640563213 |
|---|
| Product | flagellar protein export ATPase FliI |
|---|
| Protein accession | YP_001244302 |
|---|
| Protein GI | 148269842 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1157] Flagellar biosynthesis/type III secretory pathway ATPase |
|---|
| TIGRFAM ID | [TIGR01026] ATPase FliI/YscN family
[TIGR03496] flagellar protein export ATPase FliI
[TIGR03497] flagellar protein export ATPase FliI |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAGTGAAG AAGATTTCAA TAAATTCAAC GGAAGGGTCA CAAGAGTGGT AGGGCTCACC
GTGGAATCAA AAGGACCAGA CGCTTTTCTT GGAGAAATGT GTAAAATTTC ACTTCAAAAC
GGCAAGAACG CACTCGCAGA GGTGGTTGGT TTCAGGGAAG AAAGCGTTAT TCTCATGCCT
TACGAGGATG TCTCCGGATT GAAGATGAGC TGTGAAGTCA TCAGAACTAA CAAAGTACTC
GAAGTCGGTG TCAGCAGAAA GATGATCGGA AGGGTGTTCG ATGGCCTGGG ACGTCCAATA
GATGGAAAAC CTTTCGTCCC GGAAGACAGA TACCCTCTGA CCAACAACCC TCCAAACCCT
CTGAAAAGAC GAAGAATAAA AGATCCTCTA CCAGTGGGCA TACGATCGAT AGATGGCCTC
ATAACAGTGG GCAAGGGCCA GAGAATAGGG ATTTTCGCGG GTAGCGGTGT TGGGAAAAGC
ACACTTCTTG GAATGATTGC ACGAAACACA ACGGCGGATG TTAACGTGCT GGCTCTCATC
GGTGAGCGCG GAAGAGAGGT CAGAGAATTC ATAGAGAGGG ACCTTGGAGA AGAGGGGCTG
AAGCGGTCCA TACTGGTGGT CTCAACCTCC GATCAGCCTG CCCTTGCCAG AGTGAAATCT
CTTCTCACCG CCACCAGTAT AGCGGAATTC TTCAGAGATT TGGGATACGA TGTTCTTCTG
ATGGTGGACT CTCTCACCAG ATGGGCCATG GCCCAGAGAG AAGTGGGACT CGCAGTGGGA
GAGCCTCCCA CCACCAGGGG GTATCCACCA AGTGTTTTTG CCGGCCTTCC AAAGATACTC
GAAAGGGCAG GAAACTCAGA CAAAGGTAGC ATAACAGCGA TTTACACTGT GCTCGTCGAA
GCGGACGATT TCAACGAACC CATTTCCGAC ACTGTCAGAT CCATCGTAGA TGGACACATA
ATTCTTTCGA GGAGACTTGC CGAATCGAAT CACTACCCAG CAGTCGACGT TCTTGCAAGT
GTGAGCCGAT TGATGAACGA TATCGTCACT GAAGAACACA GGGAGGCGGC GAACCGCCTC
CGATCGCTGA TGTCGGCTTA TGAATCCGCA AAAGATCTGA TTGAAATCGG CGCTTACAAG
AGCGGAACCA ATCCACTCGT TGACAAAGCC GTGGAAATGA AAGACGAGAT CGATTCTTTT
CTGAAACAGG GTGTCTTTGA AAAATCTTCA TTCGAGGAAA CCCTTCAAAA ACTTCTGGAT
CTATACCTGA GATCTCTTGA CTAA
|
|---|
| Protein sequence | MSEEDFNKFN GRVTRVVGLT VESKGPDAFL GEMCKISLQN GKNALAEVVG FREESVILMP
YEDVSGLKMS CEVIRTNKVL EVGVSRKMIG RVFDGLGRPI DGKPFVPEDR YPLTNNPPNP
LKRRRIKDPL PVGIRSIDGL ITVGKGQRIG IFAGSGVGKS TLLGMIARNT TADVNVLALI
GERGREVREF IERDLGEEGL KRSILVVSTS DQPALARVKS LLTATSIAEF FRDLGYDVLL
MVDSLTRWAM AQREVGLAVG EPPTTRGYPP SVFAGLPKIL ERAGNSDKGS ITAIYTVLVE
ADDFNEPISD TVRSIVDGHI ILSRRLAESN HYPAVDVLAS VSRLMNDIVT EEHREAANRL
RSLMSAYESA KDLIEIGAYK SGTNPLVDKA VEMKDEIDSF LKQGVFEKSS FEETLQKLLD
LYLRSLD
|
|---|
| |