Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpet_0705 |
Symbol | |
ID | 5170941 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga petrophila RKU-1 |
Kingdom | Bacteria |
Replicon accession | NC_009486 |
Strand | + |
Start bp | 708123 |
End bp | 708833 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 640563212 |
Product | flagellar biosynthesis/type III secretory pathway protein-like protein |
Protein accession | YP_001244301 |
Protein GI | 148269841 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1317] Flagellar biosynthesis/type III secretory pathway protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTTCTCA GAAAAGATGA GGTCTTCTAC ATAGACCTTC CAAGGAAAAT AGAAAAAGAA GAAAAAGTGC AAGAAGAAAA AACAAAAGAG AACACGTCAG AGGAAATCCA AAAGATCAAA GAAATGAGAG AAAAAATCCT CTCCGAAGCT CAGGAAGAGG CCAGAAAAAT CATTGAAGGT GCCAGAAAAG ACGCAGAGGA AATCTTAAGC AACGCCTACA ACGAGGCTGA AGCTTTAAAG CTTGAAGCAA AGAAAGTCTT AGAAGAAGCA AAAACAATGA AGGACGATTT CCAGAAATAC ATTCTTGCTT TGAAGGAAAA GATCCAGAAA CAAGTAAACC AGAGAATAGA AGAGATACTT CCAGAGCTTC TCGATATACT CAAGATCCTC TTCAAAAAGA TCCTTGAAAA GGAAATGGAC GAGTCAGCAG TGGAAAGAAA GTTGAGGAGC GCTTTATCAA AATTAGTGGG CATCAAAAAT GTGAAGATCA GGATAAATCC AGAAGATGCA AAAAAACTGG ACCTCAGTGA AGTCAGCAAA GAAACTTTGA TACCGGATCC CAATGTAGAA AGAGGCGGCG TCATCGTCGA GACAGATTTT GGAATCCTGG ACAAAACGTT CTCTCATCAA TGGGAACTCG TGGAGGATAT CTTCGAAGAG GTGGTAGGAT TTGAAGGATA TACTGAAAGA ACTGAAAAAG AAGTTGAGTG A
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Protein sequence | MLLRKDEVFY IDLPRKIEKE EKVQEEKTKE NTSEEIQKIK EMREKILSEA QEEARKIIEG ARKDAEEILS NAYNEAEALK LEAKKVLEEA KTMKDDFQKY ILALKEKIQK QVNQRIEEIL PELLDILKIL FKKILEKEMD ESAVERKLRS ALSKLVGIKN VKIRINPEDA KKLDLSEVSK ETLIPDPNVE RGGVIVETDF GILDKTFSHQ WELVEDIFEE VVGFEGYTER TEKEVE
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