Gene Tpet_0705 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpet_0705 
Symbol 
ID5170941 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga petrophila RKU-1 
KingdomBacteria 
Replicon accessionNC_009486 
Strand
Start bp708123 
End bp708833 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content40% 
IMG OID640563212 
Productflagellar biosynthesis/type III secretory pathway protein-like protein 
Protein accessionYP_001244301 
Protein GI148269841 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1317] Flagellar biosynthesis/type III secretory pathway protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTCTCA GAAAAGATGA GGTCTTCTAC ATAGACCTTC CAAGGAAAAT AGAAAAAGAA 
GAAAAAGTGC AAGAAGAAAA AACAAAAGAG AACACGTCAG AGGAAATCCA AAAGATCAAA
GAAATGAGAG AAAAAATCCT CTCCGAAGCT CAGGAAGAGG CCAGAAAAAT CATTGAAGGT
GCCAGAAAAG ACGCAGAGGA AATCTTAAGC AACGCCTACA ACGAGGCTGA AGCTTTAAAG
CTTGAAGCAA AGAAAGTCTT AGAAGAAGCA AAAACAATGA AGGACGATTT CCAGAAATAC
ATTCTTGCTT TGAAGGAAAA GATCCAGAAA CAAGTAAACC AGAGAATAGA AGAGATACTT
CCAGAGCTTC TCGATATACT CAAGATCCTC TTCAAAAAGA TCCTTGAAAA GGAAATGGAC
GAGTCAGCAG TGGAAAGAAA GTTGAGGAGC GCTTTATCAA AATTAGTGGG CATCAAAAAT
GTGAAGATCA GGATAAATCC AGAAGATGCA AAAAAACTGG ACCTCAGTGA AGTCAGCAAA
GAAACTTTGA TACCGGATCC CAATGTAGAA AGAGGCGGCG TCATCGTCGA GACAGATTTT
GGAATCCTGG ACAAAACGTT CTCTCATCAA TGGGAACTCG TGGAGGATAT CTTCGAAGAG
GTGGTAGGAT TTGAAGGATA TACTGAAAGA ACTGAAAAAG AAGTTGAGTG A
 
Protein sequence
MLLRKDEVFY IDLPRKIEKE EKVQEEKTKE NTSEEIQKIK EMREKILSEA QEEARKIIEG 
ARKDAEEILS NAYNEAEALK LEAKKVLEEA KTMKDDFQKY ILALKEKIQK QVNQRIEEIL
PELLDILKIL FKKILEKEMD ESAVERKLRS ALSKLVGIKN VKIRINPEDA KKLDLSEVSK
ETLIPDPNVE RGGVIVETDF GILDKTFSHQ WELVEDIFEE VVGFEGYTER TEKEVE