| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_0703 |
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| Symbol | |
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| ID | 5170972 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | + |
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| Start bp | 705511 |
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| End bp | 707109 |
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| Gene Length | 1599 bp |
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| Protein Length | 532 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640563210 |
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| Product | flagellar M-ring protein FliF |
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| Protein accession | YP_001244299 |
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| Protein GI | 148269839 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1766] Flagellar biosynthesis/type III secretory pathway lipoprotein |
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| TIGRFAM ID | [TIGR00206] flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF) |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.408742 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACATTG TTGAACGATT GAGAGATCTC TGGAAAAAGA TTGTAGAATT ATGGAATTCT
ATGTCTCGAG AAAGGAAATT CCTCGTGGGA GGAATAGGGA TTGCCCTTGT AATAACGATC
GTTCTGTTCG CCGTTGTAGC GTCCGTTCCT CACTACAGAC TCCTTGTGGC TGGCCTCAAC
GAAGACGAGG CAGGTGTGAT CATCCAGAAG CTCGAGGAGA TGAACATTCC TTACAAAGTA
TCCCCTGGGG GAGATATATA CGTTCCCGAC AGTTACAACG TCTATGAACT CAGAATGAAA
CTGGCGTCTG AAGGGGTTCT TGGAAGTTCA AGGAAAGGTT TTTCGATACT CAACGAAAAC
TCCTTCGGGG CCACGAGCTT CGACAAGCAG GTCAAATATC AGATCGCTTT ACAGGAGGAA
CTCGAAAGAA GCATCATGAC GATAAAAGGT GTGAAAGATG CAAGAGTTCA CCTGGTCCTT
CCGAAGTACA CCTATTACGT TCGTGGTGAG ATGGCAGAAC CTCGAGCATC AGTTCTCGTA
GTCTTGGAAC CCGGTGCAGA ACTCACCCGC GAACAGGTGA GAGGAATCGT TGAGCTCGTC
TCAGGAGCCG TTGAAGGGTT GAAACCGGAG AACGTGAGGG TAGTGGATAA CTACTCCAGA
TCGCTGAGCG ATATGTTAGA AACAGACGAA GGAACTTTCC TTGCCTCCAG CAAACTGGAA
TTGAAACAAC AGCTTGAAAA ATACTACGAA AGCAAAATAA AGAAAGCACT GGAAAGTGTC
TTCGGCCCTG GAAGGGTGGA GGTAATACCA GACATATCCA TCAACTGGTC CAAGATAGAA
ACGGAGATGA AAAAGTACGA AGCACCTGCC AGAAGAGAAG GTCTGGTGAG GAGTCAGGAG
ACGCAGGTGG AGAAGAGCCA AAACCTTTCT CCAACCGGAG GACCAGCGGG AACGGATTCG
AACATACCGC CTCTCACCTA TCCATCAGCC ACATCCGAAG GAACGAGTAC CTACGAACGA
ACCCATACCA TCACCAACTA CGAATTGAAC GAAGTGTATC AGAAGATAAT ACAGAACCGC
GAAGGGGAGA TCTCCTCGCT TTCCGTCGCC GTCATAATCG ATGCCTCTTC TTCTGTCCTG
CAAAACAGCA GTGACTGGAG CGGTGTGATA AACGATCTCG TGGAAAAAGG GGTGGGCTCC
ATAACGTCTT CCGCCTCTCT CAGCGTCGCG GTTGCCTTTT TGCCATTCGA TCGCTCCATC
GAAAGAGCTC TTCAGGAAGA GTTGAAACAG ATTGAAACGA GAAGAAGGTT CATCCTGTAC
TCGGTGGGAA TAGCCCTGCT TGGATTTCTC ACGTTCATAC TCATCTATCT TGTGATCGTT
CAAATAAGAA GAATAAGGGC AAGAAGACTC GCAGAAGAAC GGAGAAGAAA ACTGGAAGAA
GAGGTGAAAG AAATCCTCCA GGAAGAATTG AAGGAGGAAG AGGTATCGCC AGAAGAAAAG
GAACTGCTCG AACTTGTAGA AGAGCTGGAG AACATCTTTT CCCGTTCACC TTCCGACATC
GCCGAGATAG TCCGACTGTG GTTCTTTGAA AGGGGATGA
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| Protein sequence | MNIVERLRDL WKKIVELWNS MSRERKFLVG GIGIALVITI VLFAVVASVP HYRLLVAGLN
EDEAGVIIQK LEEMNIPYKV SPGGDIYVPD SYNVYELRMK LASEGVLGSS RKGFSILNEN
SFGATSFDKQ VKYQIALQEE LERSIMTIKG VKDARVHLVL PKYTYYVRGE MAEPRASVLV
VLEPGAELTR EQVRGIVELV SGAVEGLKPE NVRVVDNYSR SLSDMLETDE GTFLASSKLE
LKQQLEKYYE SKIKKALESV FGPGRVEVIP DISINWSKIE TEMKKYEAPA RREGLVRSQE
TQVEKSQNLS PTGGPAGTDS NIPPLTYPSA TSEGTSTYER THTITNYELN EVYQKIIQNR
EGEISSLSVA VIIDASSSVL QNSSDWSGVI NDLVEKGVGS ITSSASLSVA VAFLPFDRSI
ERALQEELKQ IETRRRFILY SVGIALLGFL TFILIYLVIV QIRRIRARRL AEERRRKLEE
EVKEILQEEL KEEEVSPEEK ELLELVEELE NIFSRSPSDI AEIVRLWFFE RG
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