Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpet_0699 |
Symbol | |
ID | 5170865 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga petrophila RKU-1 |
Kingdom | Bacteria |
Replicon accession | NC_009486 |
Strand | - |
Start bp | 702776 |
End bp | 703714 |
Gene Length | 939 bp |
Protein Length | 312 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640563206 |
Product | D-cysteine desulfhydrase |
Protein accession | YP_001244295 |
Protein GI | 148269835 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2515] 1-aminocyclopropane-1-carboxylate deaminase |
TIGRFAM ID | [TIGR01275] pyridoxal phosphate-dependent enzymes, D-cysteine desulfhydrase family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000000108217 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGAATCG ATCTTTCCCT TAAACCCACA CCTGTTCAGT TTCTCAAAAG ACTCTCGGAA GAATACGGGT TCAACATCTA CGTTAAAAGA GACGATCTCA CAGAGCTTGT GGGATCGGGC AACAAAATCA GAAAGCTGGA GTATCTTCTC TGGGAAGCTC TTAAAAAAGG AGCAACAACT GTCTTCACCT GTGGAGGTCT TCAGTCGAAC CATGCCAGAG CAACGGCATA CGTTTCGAGA AAACACGGTT TGAAACCTGT TCTCTTCCTC AGAAAAGGAG AGAAGGTTCT GAACGGAAAT CTTCTCCTCG ACATTCTCCT CGGTGCTGAA ATAGTGGAAG TTTCCCAGGA AGAGTACGAA CGCATCGATG AGATCTTCGA TGTTCACAAA AAGATGAGAG AGAAGAAAGG TGAAAAGGTG TACGTGATAC CCGAAGGGGG ATCGAACTCC CTTGGGGCCT TTGGCTACTT CAATGCGGTG CTGGAGATGA AAGATCAATT GAACCTCGAA TCTTTCGATG CTATCGTGTG TGCTGTTGGA AGTGGTGGAA CCATAGCGGG TTTGTCAGCT GGAATTTCCT TTCTGGAATA TCACGTACCT GTGGTGGGTG TGAACGTCAC CACGAAAAAC TCGGATTATT TTGTGGGGAA GGTGAAAAGA ATAATTAGTG GTATGGAAGA GCATGGTCTG AAGATCAACG AAACTGTTTT CAAAGTGGTG GACGATTACA GAGGGCCGGG ATATGCGATT CCGTCCAGTG AGGATGTGGA GATCTTGAAA GAAGTAGCTT CGATAGAAAG TATCATCCTC GATCCGGTCT ACACGGCAAA AGCCTTCAGA GGAATGATCG AAATGTTCAG AAATTCAGGA AAGAACGTTC TTTTCATCCA CACGGGGGGA ATATTCGGTC TGTTCGCGCA GAGCGGGAGG TTGGTATAA
|
Protein sequence | MRIDLSLKPT PVQFLKRLSE EYGFNIYVKR DDLTELVGSG NKIRKLEYLL WEALKKGATT VFTCGGLQSN HARATAYVSR KHGLKPVLFL RKGEKVLNGN LLLDILLGAE IVEVSQEEYE RIDEIFDVHK KMREKKGEKV YVIPEGGSNS LGAFGYFNAV LEMKDQLNLE SFDAIVCAVG SGGTIAGLSA GISFLEYHVP VVGVNVTTKN SDYFVGKVKR IISGMEEHGL KINETVFKVV DDYRGPGYAI PSSEDVEILK EVASIESIIL DPVYTAKAFR GMIEMFRNSG KNVLFIHTGG IFGLFAQSGR LV
|
| |