| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_0695 |
|---|
| Symbol | |
|---|
| ID | 5171687 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermotoga petrophila RKU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009486 |
|---|
| Strand | - |
|---|
| Start bp | 699010 |
|---|
| End bp | 699867 |
|---|
| Gene Length | 858 bp |
|---|
| Protein Length | 285 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 640563202 |
|---|
| Product | auxin efflux carrier |
|---|
| Protein accession | YP_001244291 |
|---|
| Protein GI | 148269831 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0679] Predicted permeases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.229992 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAATTTT CGGTCATCAT ACTGATCGGT TATCTGACGA AGAAATTTTT CGAAAGAGAT
ACTGGTAAGG TCCTTTCGAA ACTGGTGGTG AATTTCACAC TGCCTGCGGC GATCTTCTAC
AGTTTTTCCA CTTCGCGTTT TCACTTTTCG AAGTTCGCCT TCACTGCAAC GGGTATTTTG
AGTAACCTTC TTCTCATCTT TCTTGCCTTT CTGTTTTTCT CGAGAATAAA GGATCCAAGA
GTGAGAATTC CGATCGTTCT CTCTTTCGTT GGTTTCAACA CAGGTTTGTT CATGTATCCT
CTGGCGGAAA GCCTCTGGGG AGAAGCATCG GTGGTTAACT TCGCCCTGTT CGACCTGGGG
AATTCTTTCT TCATATTTGG TGTGGGGAAA GCAGTAGCTG AGCGGAACAA AAAGGGAATA
CTGAAGGTTT TCACCTTTCC ACCGTTTCTG TTCCTCCTTG TCGGAATAAC GATGAACAGC
CTCAAAGTGG TTCCACCTGG TATTGTTCTC GATGTTGCGC GGACGATAAA GAACGCTAAT
GCCTTCCTCG TGTTTTTTCT TGTGGGATAC TATCTCAGCT TCAGATCGGT TTACGACAAA
TTCCGTCTGA TTTTAATGGC GGGACTCGTA AAGTATGCCG CCGGGTTGCT TGTTGCTCTG
ATCGCAGTGA AGATCTTCTC TCTTTCTTCT TTCGAGGAAA TGAACCTGTT TCTTTCACCG
CTTCTTCCTT CTGCCATCAT GACACTCGTG TACTCGGTTG AAAAGGGTTA CGATGCGGAA
CTCGCGAGCG GGCTCATCAC TTTCTTCACG ATCGTTTCAA CGTCCATAAT CATGGCGGTA
AACTATACAT GGGGGTGA
|
|---|
| Protein sequence | MEFSVIILIG YLTKKFFERD TGKVLSKLVV NFTLPAAIFY SFSTSRFHFS KFAFTATGIL
SNLLLIFLAF LFFSRIKDPR VRIPIVLSFV GFNTGLFMYP LAESLWGEAS VVNFALFDLG
NSFFIFGVGK AVAERNKKGI LKVFTFPPFL FLLVGITMNS LKVVPPGIVL DVARTIKNAN
AFLVFFLVGY YLSFRSVYDK FRLILMAGLV KYAAGLLVAL IAVKIFSLSS FEEMNLFLSP
LLPSAIMTLV YSVEKGYDAE LASGLITFFT IVSTSIIMAV NYTWG
|
|---|
| |