| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_0690 |
|---|
| Symbol | |
|---|
| ID | 5170935 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermotoga petrophila RKU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009486 |
|---|
| Strand | + |
|---|
| Start bp | 693807 |
|---|
| End bp | 695099 |
|---|
| Gene Length | 1293 bp |
|---|
| Protein Length | 430 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 640563197 |
|---|
| Product | UDP-N-acetylmuramoylalanine--D-glutamate ligase |
|---|
| Protein accession | YP_001244286 |
|---|
| Protein GI | 148269826 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0771] UDP-N-acetylmuramoylalanine-D-glutamate ligase |
|---|
| TIGRFAM ID | [TIGR01087] UDP-N-acetylmuramoylalanine--D-glutamate ligase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGAATAG GCTTTCTGGG TTTTGGAAAG AGCAACAGGT CCCTTCTGAA ATATCTTTTG
AAGCATCAAG AAGCGAAATT TTTCGTGAGC GAAGCAAAAA CTCTGGACGG TGAAACGAAA
AAATTTCTGG AAGAACACTC CGTGGAATAC GAAGAAGGAG GCCACACCGA AAAACTCCTG
GAGTGCGATG TTGTTTACGT GAGTCCCGGA ATAAAACCAG ACACGAGCAT GATCGAACTC
CTCTCTTCCA GAGGTGCGAA ACTATCCACA GAACTTCAGT TTTTCTTGGA CAATGTAGAT
CCAAAAAAGG TCGTGGGCAT CACGGGGACT GACGGAAAAA GCACCGCTAC CGCCCTCATG
CATCATGTGC TTTCCGAAAG GGGATTCAAA TCTTTCCTTG GTGGAAACTT TGGTACACCG
GCTGTGGAAG CCCTGGAAGG AGAGTACGAC TATTACGTAC TGGAAATGAG CAGTTTCCAG
CTTTTCTGGA GCGAAAGACC GTATCTTTCA AATTTCCTCG TTCTGAACAT ATCCGAAGAT
CATCTGGATT GGCACTCCTC TTTCGAAGAA TACGTTGATT CAAAGTTGAA ACCGGTTTTT
CTCCAGACAG AAGGAGATCT GTTCGTCTAC AACAAGCACA TAGAGCGCTT GAAAGATCTG
GAAGGTGTGA GATCCAGAAA AATCCCTTTC TGGACGGATG AAAACTTTGC TACAGAAAAG
GAACTGATCG TTCGCGGGAA GAGATACACA CTTCCTGGAA ACTATCCGTA TCAGATGAGG
GAAAACGTAC TGGCAGTTTC CGTTCTTTAC ATGGAAATGT TCAACGAACT GGAAAGTTTT
CTGGAACTTC TCAGAGATTT CAAACCGCTC CCGCACAGAA TGGAATACCT GGGTCAAATA
GATGGAAGGC ATTTTTACAA CGACTCGAAA GCCACGTCGA CACACGCGGT ACTGGGTGCG
CTCTCCAACT TCGACAAGGT AGTTCTCATA ATGTGTGGAA TCGGTAAAAA AGAAAATTAC
TCTCTCTTCG TGGAAAAAGC CAGTCCAAAG CTGAAACATC TCATCATGTT CGGAGAGATA
TCGAAAGAAC TCGCTCCGTT TGTGGGGAAA ATTCCTCACA GCATCGTTGA AAATATGGAA
GAAGCCTTTG AAAAAGCAAT GGAAGTCTCT GAAAAAGGTG ATGTGATTCT TCTCAGCCCG
GGAGGAGCGA GCTTTGACAT GTACGAAAAC TACGCAAAAA GAGGTGAACA CTTCAGAGAG
ATCTTCAAAC GACACGGAGG GGATGAAGTT TGA
|
|---|
| Protein sequence | MRIGFLGFGK SNRSLLKYLL KHQEAKFFVS EAKTLDGETK KFLEEHSVEY EEGGHTEKLL
ECDVVYVSPG IKPDTSMIEL LSSRGAKLST ELQFFLDNVD PKKVVGITGT DGKSTATALM
HHVLSERGFK SFLGGNFGTP AVEALEGEYD YYVLEMSSFQ LFWSERPYLS NFLVLNISED
HLDWHSSFEE YVDSKLKPVF LQTEGDLFVY NKHIERLKDL EGVRSRKIPF WTDENFATEK
ELIVRGKRYT LPGNYPYQMR ENVLAVSVLY MEMFNELESF LELLRDFKPL PHRMEYLGQI
DGRHFYNDSK ATSTHAVLGA LSNFDKVVLI MCGIGKKENY SLFVEKASPK LKHLIMFGEI
SKELAPFVGK IPHSIVENME EAFEKAMEVS EKGDVILLSP GGASFDMYEN YAKRGEHFRE
IFKRHGGDEV
|
|---|
| |