| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_0688 |
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| Symbol | |
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| ID | 5170936 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | + |
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| Start bp | 691625 |
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| End bp | 692905 |
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| Gene Length | 1281 bp |
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| Protein Length | 426 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640563195 |
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| Product | UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase |
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| Protein accession | YP_001244284 |
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| Protein GI | 148269824 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0770] UDP-N-acetylmuramyl pentapeptide synthase |
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| TIGRFAM ID | [TIGR01143] UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGATC TCCTCACAAG GCGCTTCGTT CTGAACTCGA AAGAAGTGAG AGAAGGTGAC
GTGTTCGTTG CCGTGAAAGG GAAAAGATTC GATGGTCACG ATTTTATAGA TGAAGCCCTC
AAGAATGGTG CTTATGCAGT TATCGCTGAG AGAAAAACAG TGAATTCCGA TAGAATATTT
CTCGTAGAAA GTTCCGTTGA CGCACTTGCA AAACTGGCCC GAGAAAAGCT CGGAAATTTT
TCTGGCACGG TCGTCGGTAT AACGGGTTCG TCAGGAAAGA CCACTACGAA AGAAATATTG
TACAACCTTC TCAAGAACAA AAGAAGTGTT TTCAAAACAC CGGGAAACAT GAACACGGAG
TACGGGTTGC CACTCTCCAT CCTCAACGAT TACAAAGGAG AGGAAATCCT GGTTCTCGAA
ATGGCCGCGA GCAGGCCCGG TGATATCGCT CACCTGTGTA AAATCGCTCC TCCGGATGTC
GCCGTTCTCC TCAACGTTGG AAACGCCCAT CTCGAGTTTT TTGGAACACG AGAGAGAATC
ATGGAAACCA AAATGGAGAT CATCAAGCAC TCGAAAGAAA ATGCAACAGC CGTAACACTC
TTTGACGATC CCGATTTGAG AAGGGAAGTA CCTTGTTACA GAAAAACGTT GTTCTTCGGC
AAAGAAGGCG GTGACTCGGT TCTAAAGGAT TGGTGGTACT ATGAGGGTTC CACGATCGCA
GAGTTCGAAG CTTTTGATTC TCTTTTTACA GTGAAACTCT CCGGATACTG GAACGGAGGG
CAACTCTTGA ACATCGCCGC TTCTCTGTGT GTCATGAGAG CTTTGGGCGA AACTGTGGAT
ATCTTCGATC TTGCCAGCCT GAAAACAGTT CCCGGCCGTT TCAATGTGAG AGAAAAAAAA
GATGTGCTGA TCGTGGACGA TACGTACAAC GCAAGCCCTG AAGCGTTTCA AACTTCTATA
GAGGCGCTTC TTCGCTTTCC TGGAAGGAGA TTCGCCGTTG TTGGAGCAAT GAAAGAGCTT
GGGGAGAGGT CGAAGGAATT TCACGAAGAG CTCGGAGAGA GATTGAACGT TCTGGATGGG
GTGTACATTT TCTTGTCAGA ACCCGAAGCG GAATGGATCA AGTCCAAGAA GATCATTCTG
AAGTCAGACG ATCCCGAAAA GATAGCGAAA GATCTTGCTT CCAGGGTAAC AGAAGGGGAT
GTGGTTCTCT TCAAAGCTTC AAGAGCGGTG AGAATAGAAA AAGTTCTGGA AATGTTTGAA
AAGGAGCTGG AGAGAAAATG A
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| Protein sequence | MKDLLTRRFV LNSKEVREGD VFVAVKGKRF DGHDFIDEAL KNGAYAVIAE RKTVNSDRIF
LVESSVDALA KLAREKLGNF SGTVVGITGS SGKTTTKEIL YNLLKNKRSV FKTPGNMNTE
YGLPLSILND YKGEEILVLE MAASRPGDIA HLCKIAPPDV AVLLNVGNAH LEFFGTRERI
METKMEIIKH SKENATAVTL FDDPDLRREV PCYRKTLFFG KEGGDSVLKD WWYYEGSTIA
EFEAFDSLFT VKLSGYWNGG QLLNIAASLC VMRALGETVD IFDLASLKTV PGRFNVREKK
DVLIVDDTYN ASPEAFQTSI EALLRFPGRR FAVVGAMKEL GERSKEFHEE LGERLNVLDG
VYIFLSEPEA EWIKSKKIIL KSDDPEKIAK DLASRVTEGD VVLFKASRAV RIEKVLEMFE
KELERK
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