| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_0687 |
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| Symbol | |
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| ID | 5170642 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | + |
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| Start bp | 690156 |
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| End bp | 691628 |
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| Gene Length | 1473 bp |
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| Protein Length | 490 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640563194 |
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| Product | UDP-N-acetylmuramyl-tripeptide synthetase |
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| Protein accession | YP_001244283 |
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| Protein GI | 148269823 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0769] UDP-N-acetylmuramyl tripeptide synthase |
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| TIGRFAM ID | [TIGR01085] UDP-N-acetylmuramyl-tripeptide synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATATAT CAACTATCGT GTCGAATTTA AAGGATCTCA TTTTAGAAGT TCGTGCACCC
TACGATCTCG AAATAACAGG TGTGTCCAAC CACTCTTCTA AGGTAAAAAA AGGAGATCTC
TTCATCTGCA GAAGAGGGGA AAAGTTCGAT TCCCACGAGA TAATACCCGA AGTGATGGAA
AAAGGAGCAG TGGCTGTTGT CGTCGAAAAA GAGATAGATC TGGATTTTCC CCACATTCAG
GTTTTCGATT CTCGCTATTT TGAGGCAAAG GTAGCCAGCC TCTTCTTCGA AGACCCCTGG
AAAGACGTTT TAACCTTTGG AGTCACAGGA ACAAACGGCA AAACCACAAC AACCATGATG
ATCTACCACA TGCTCACCTC CCTTGGAGAA AAAGGAAGCG TTCTCACCAC CGCTGTGAAG
AGAATTCTTG GAAGCTCCTA CTACGACGAC ATCACCACAC CGGATGCGAT CACCATCCTT
TCCGCCATGA AAGAGAACAA GGAAGGTGGA GGAAAGTTCT TCGCCCTCGA AGTTTCTTCT
CACGCACTGG TTCAAAAAAG AGTCGAGGGA GTCAGATTCG ATGTGGGTAT ATTCACCAAC
ATATCACGCG ATCACCTCGA CTTTCACGGT ACATTCGAGA ACTATCTGAA AGCAAAGCTT
CATCTCTTCG ATCTGTTGAA AGATGACGGG ATAGCCATTC TGAACGAATC ATTGGCAGAC
ACTTTCAATC GAAAATCGAG AAAAATCACC TTCGGAACAT CGAAAAACGC CGATTACAGG
CTGGGAAATA TAGAGGTGAA CTGGGAGGGG ACACGGTTCG TTCTGGAAAC TCCCGATGGT
TTATTGAGGG TTTTCACAAA GGCGATAGGT GATTTCAACG CTTACAACGC CGCGGCCGCC
ATTGCTGCTC TTCACCAGCT CGGATACGAT CCAAAAGACC TGGCGAGTTC CCTCGAAACG
TTCACGGGGG TCGAGGGAAG ATTCGAGGTA GTACGTGGAG CAAAGAAGAT TGGGCTCAAC
GTTGTTGTCG ACTTCGCCCA TTCTCCAGAC GCACTGGAAA AGCTCTTGAA AAATGTCAGA
AAGATCTCTC AGGGAAGAGT GATAGTTGTC TTCGGGGCCG GGGGAAACAG CGACAGAGGA
AAACGTCCCA TGATGTCTGA GGTCGCTTCA AAACTCGCTG ATGTTGTAAT CCTCACAACC
GATGACCCAC GAGGAGAAGA CCCGGAACAG ATAATGGAAG ACTTGATAAA GGGTATTGAT
AAACGCAAAC CGTATCTGGT GCTCTTTGAC AGAAGGGAAG CCATTGAAAC GGCCCTAACT
ATCGCTAACA GAGGAGATTC TGTTGTCATA GCGGGAAGAG GTCACGAAAG ATACCAGATA
ATCGATGAAG AAAAGAAGGT ACCGTTCCAG GACAGAGAAG TTGTGGAAGA GATCATAAGA
GACAAGCTGA AAGGGAGGAA ATATGCACAA TGA
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| Protein sequence | MNISTIVSNL KDLILEVRAP YDLEITGVSN HSSKVKKGDL FICRRGEKFD SHEIIPEVME
KGAVAVVVEK EIDLDFPHIQ VFDSRYFEAK VASLFFEDPW KDVLTFGVTG TNGKTTTTMM
IYHMLTSLGE KGSVLTTAVK RILGSSYYDD ITTPDAITIL SAMKENKEGG GKFFALEVSS
HALVQKRVEG VRFDVGIFTN ISRDHLDFHG TFENYLKAKL HLFDLLKDDG IAILNESLAD
TFNRKSRKIT FGTSKNADYR LGNIEVNWEG TRFVLETPDG LLRVFTKAIG DFNAYNAAAA
IAALHQLGYD PKDLASSLET FTGVEGRFEV VRGAKKIGLN VVVDFAHSPD ALEKLLKNVR
KISQGRVIVV FGAGGNSDRG KRPMMSEVAS KLADVVILTT DDPRGEDPEQ IMEDLIKGID
KRKPYLVLFD RREAIETALT IANRGDSVVI AGRGHERYQI IDEEKKVPFQ DREVVEEIIR
DKLKGRKYAQ
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