| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_0681 |
|---|
| Symbol | |
|---|
| ID | 5170331 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermotoga petrophila RKU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009486 |
|---|
| Strand | - |
|---|
| Start bp | 684965 |
|---|
| End bp | 685816 |
|---|
| Gene Length | 852 bp |
|---|
| Protein Length | 283 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 640563188 |
|---|
| Product | radical SAM domain-containing protein |
|---|
| Protein accession | YP_001244277 |
|---|
| Protein GI | 148269817 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2516] Biotin synthase-related enzyme |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATACTCA GAGCATCTTA CGGAACGATT CAGAAAGTGA ATGGAAAATC GTCTTTAGAA
ATGGACACCG CTTATTTCAT GCTTGGGGAA AGGTGCGTTT ACAACTGTCT GTACTGTGCT
CAGTCACGCT CTTCCACAAG CCCGTCTCAT TTTCTCTCCA GGGTTATCTG GAAAGAGATT
CCGGAAGATC TACTCGACGA ATTGAACGAT TGTTTCAAGA GGATCTGTAT CCAAGTCGTT
TCTTATGCTG GGTACAGAGA AGACCTCAGA TCGATCATTC CGAGGTTTCG AATACCGGTT
TCGGTGAGCG TCAGAGCTAT CAGTGTGGAG GAGGTTACAG AGTATTTCAA ACTGGGAGCC
GACAGAGTGG ATATCGCTGT GGATGTTCCC AACGAAACTC TCTTTGAAAA AATCAGAGGA
GGAAAATACG AGAGACATCT CCATATTCTC GAGAAAGCAG CAGAAATGTT TCCCGGAAAA
ATCACGACAC ATGTGATAGT TGGATTGGGT GAAAGTGATA AAGACATTGT TGATTTCACG
GTGTGGGCAA AGGAAAGAAA CATCGTGGTT TCTCTGTTTG CTTTTACACC AATCAGGGGA
ACGGCGTTTG AAAACAGAGA AAGACCTTCC CTAGAGCGTT ACAGGAAAAT CCAGCTGGCA
ACTTACCTTC TCGAGAAAAA CCTGATAAAA CCGGAGAATA TAATTTTCGA CTCAAATGGT
AAAATTATTG ACGTTGAATG GAACGGCGAG TTTCCAGAAG AGGCTTTAAG AACCCGCGGA
TGCCCTCACT GCACGCGCCC CTACTACAAC GAAAGTCCAA GAGGCCCTAT TTACAACGTT
CACTGGAGGT GA
|
|---|
| Protein sequence | MILRASYGTI QKVNGKSSLE MDTAYFMLGE RCVYNCLYCA QSRSSTSPSH FLSRVIWKEI
PEDLLDELND CFKRICIQVV SYAGYREDLR SIIPRFRIPV SVSVRAISVE EVTEYFKLGA
DRVDIAVDVP NETLFEKIRG GKYERHLHIL EKAAEMFPGK ITTHVIVGLG ESDKDIVDFT
VWAKERNIVV SLFAFTPIRG TAFENRERPS LERYRKIQLA TYLLEKNLIK PENIIFDSNG
KIIDVEWNGE FPEEALRTRG CPHCTRPYYN ESPRGPIYNV HWR
|
|---|
| |