Gene Tpet_0674 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpet_0674 
Symbol 
ID5170605 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga petrophila RKU-1 
KingdomBacteria 
Replicon accessionNC_009486 
Strand- 
Start bp679551 
End bp680564 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content48% 
IMG OID640563181 
ProductDNA protecting protein DprA 
Protein accessionYP_001244270 
Protein GI148269810 
COG category[L] Replication, recombination and repair
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0758] Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake 
TIGRFAM ID[TIGR00732] DNA protecting protein DprA 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.0035594 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTCCTC TTGAGATGGC TCTGCTCGTT CATCGTGGTG AGTTCCATCT TCGGGAACTG 
GAACCGGAGT TACCTCTCGA AAAATTTCTG AAGAACGCGG ATCCAAAAAA GACGAGGAAG 
TTTCTTGAAA AGTGCGGAAA AGAAGAATTA GAAAGGCAAA AGGAACTGAT AAGGAAACAC 
AATGTGAAGC TCGTTTCGTT CTGGGAAGAT GACTACCCCC AGCACTTGAG GGAGATCAGG 
TATCCGCCAG CTGTTCTTTT TGTGAGGGGC AACACGGAAC TCTTGAAAGA AAAATGTGTG 
GGAGTTGTAG GAACAAGGAG ACCCACAAGT TATGGAGTGA ACGTCACAAA GCGCTTTGTT 
AAACTGCTGA GCGAATACTT TGTGATCGTT TCCGGCATGG CGTTTGGAAT AGATTCCGTT 
GCACACAAGG AAGCCCTGAG TTCTGGAGGA AAGACGGTGG CGGTTCTCGG CACAGGAGTG 
GATGTTGTTT ATCCGCGATC GAACGAACGA CTCTTCCATG AAATTGTGAA AAACGGGTGT 
GTTGTCAGTG AGTATCCAAT GGGAACTCGT GCTCGAAAAC ATCATTTTCC AGCGAGAAAT 
CGAATCATAG CGGGTCTTTC TGATGCGATC ATCGTCACAG AGGCTCCCAT CAAAAGCGGT 
GCACTCATAA CGGTGAAGTT TGCTCTGGAA AGCGGTCGTG ATGTGTTCGC CGTTCCCGGT 
GATATAGATA GGAAGACCAG CAAAGGTACG AACTATCTGA TAAAGTCGGG TGCCTATCCC 
CTCACCGACG AGGAAGACCT TGAAACTCAT TTTGGAATCA GAAGAATCGC TTCCCCATCG 
CTCGATGATG ACAAAAAGAA GATCTACGAT CTGTTGAGAA GTTCGCCAAA AACAGTCGAT 
GAGCTTGTTG AAGAATTGGG GTGGAGCGTT TCGGAGGTCC TCAGGGTGAT ATCGGAGATG 
GAACTGATGG GAATGATCTG GTTCGACGGC GGTGCATACA GATTGCTGGG GTGA
 
Protein sequence
MSPLEMALLV HRGEFHLREL EPELPLEKFL KNADPKKTRK FLEKCGKEEL ERQKELIRKH 
NVKLVSFWED DYPQHLREIR YPPAVLFVRG NTELLKEKCV GVVGTRRPTS YGVNVTKRFV 
KLLSEYFVIV SGMAFGIDSV AHKEALSSGG KTVAVLGTGV DVVYPRSNER LFHEIVKNGC 
VVSEYPMGTR ARKHHFPARN RIIAGLSDAI IVTEAPIKSG ALITVKFALE SGRDVFAVPG 
DIDRKTSKGT NYLIKSGAYP LTDEEDLETH FGIRRIASPS LDDDKKKIYD LLRSSPKTVD 
ELVEELGWSV SEVLRVISEM ELMGMIWFDG GAYRLLG