| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_0660 |
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| Symbol | |
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| ID | 5171052 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | - |
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| Start bp | 668261 |
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| End bp | 668980 |
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| Gene Length | 720 bp |
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| Protein Length | 239 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640563167 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_001244256 |
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| Protein GI | 148269796 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.665428 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGACTGG ACAGGTATCT TTCGAACAGT GGTGTGGGAA CAAGAAAAGA AGTGAAAAAA
CTGATAAAAC AGGGCAGGGT GACCGTTAAC GGGAGAGTGG TGCTCGATCC TGGTCATTCT
GTGTCGGAGA ACGATGTTGT TGTACTCGAT GGTGAGACGG TGAACTTTCA CAGAAAGGTT
TACATTCTCT TCCACAAGCC TTCAGGATAC GTGACCAGCA CGAAAGATCC CCATTCGGAA
ACCATCATGG AATTTCTTCC CCCATTGAAA GGAATTTTCC CCGTTGGAAG GCTCGATAAA
GATGCCGAAG GTCTCCTGAT AATAACTAGC GATGGTGATT TCGCTCATCG TGTGATTTCG
CCGAAATGGT CTGTAGAAAA AGAGTACATT GTGAAGGTAG AAGGAGAAGT CACAGAAGAC
AAGATAGAAA AGTTGAAAAA TGGTGTGACT TTAAGGGACG GTTTTTTCGC AAAAGCGAAG
TGTGTGGAGA AGCTGTCGAA CGACACGTTG AAGATAGTTA TAACGGAGGG TAAATATCAT
CAGATCAAAC GGATGACGGT TGCTGTGGGT CTAAGAACAG TGCATTTGAA GAGAACTAGA
ATTGGCAGAC TCGTTCTACC CGAGGACATG AAACCTGGAG AGTACAGATT CTTGAGTGAA
GAGGAGGTGA AGAAGGTTTT TGAAAGAGAA GATCAGAAAG AAGATACTCC TCGCTCCTGA
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| Protein sequence | MRLDRYLSNS GVGTRKEVKK LIKQGRVTVN GRVVLDPGHS VSENDVVVLD GETVNFHRKV
YILFHKPSGY VTSTKDPHSE TIMEFLPPLK GIFPVGRLDK DAEGLLIITS DGDFAHRVIS
PKWSVEKEYI VKVEGEVTED KIEKLKNGVT LRDGFFAKAK CVEKLSNDTL KIVITEGKYH
QIKRMTVAVG LRTVHLKRTR IGRLVLPEDM KPGEYRFLSE EEVKKVFERE DQKEDTPRS
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