| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_0657 |
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| Symbol | trmE |
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| ID | 5171316 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | + |
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| Start bp | 664794 |
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| End bp | 666146 |
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| Gene Length | 1353 bp |
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| Protein Length | 450 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640563164 |
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| Product | tRNA modification GTPase TrmE |
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| Protein accession | YP_001244253 |
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| Protein GI | 148269793 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0486] Predicted GTPase |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00450] tRNA modification GTPase TrmE |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGACACCA TTGTCGCTGT AGCTACCCCT CCCGGAAAAG GAGCAATCGC GATTCTCAGG
TTGAGCGGTC CAGATAGCTG GAAAATCGTT CAGAAACACC TTCGAACACG ATCGGAAATC
GTTCCAAGAA AGGCAATCCA CGGCTGGATC CACGAAAACG GAGAAGATGT GGATGAAGTG
GTAGTCATTT TCTACAAATC GCCGAAGAGT TACACAGGAG AGGACATGGT AGAGGTGATG
TGCCACGGAG GACCACTCGT GGTGAAGAAG CTGCTGGATC TCTTCTTGAA ATCTGGAGCG
CGGATGGCTG AACCTGGCGA GTTCACAAAA CGAGCTTTTT TGAACGGAAA AATGGATCTC
ACTTCGGCAG AGGCTGTGAG AGATCTCATA GAGGCAAAAA GCGAAACCAG TTTGAAACTC
TCCCTGAGAA ACCTCAAGGG AGGATTGAAG GACTTTGTTG AGAGCTTGAG AAGAGAACTC
ATAGAAGTTC TTGCTGAGAT ACGGGTAGAG CTCGATTATC CAGACGAGAT AGAAACAAAC
ACAGGTGAAG TGGTAACCAG GCTGGAGCGA ATAAAAGAAA AGCTCACTAA AGAACTGAAA
AAAGCAGATG CAGGCATTCT TCTCAACAGA GGCTTCAGGA TGGTTATCGT GGGAAAGCCC
AACGTGGGAA AATCCACTCT TCTGAATCGA CTTTTGAACG AGGACAGAGC GATCGTCACA
GATATACCTG GAACAACAAG GGATGTTATC AGTGAGGAAA TCGTCATAAG AGGAATACTT
TTCAGGATAG TCGACACAGC TGGTGTGAGA TCGGAAACGA ACGATCTGGT CGAGAGACTG
GGGATAGAGA GAACTCTTCA GGAAATAGAG AAAGCCGACA TAGTACTGTT TGTGCTCGAC
GCTTCTTCAC CGCTTGACGA AGAAGACAGA AAAATCCTCG AAAGGATAAA GAACAAACGC
TATCTTGTGG TGATAAACAA AGTGGATGTG GTGGAGAAGA TAAATGAAGA GGAGATAAAA
AACAAACTCG GAACAGACAG ACACATGGTG AAGATATCTG CCCTGAAAGG AGAAGGACTT
GAAAAACTGG AGGAAGCCAT CTACAGAGAA ACTCAGGAGA TCTTTGAAAG AGGTTCTGAT
TCCCTTATAA CGAACCTTCG ACAAAAGCAG TTGCTTGAAA ACGTTAAAGG ACATCTGGAA
GACGCTATAA AGTCTTTGAA GGAAGGAATG CCGGTTGATA TGGCTTCTAT AGATCTGGAA
AGAGCTCTCA GTCTTCTCGA TGAAGTGACG GGAAGGAGTT TCAGGGAGGA CCTGCTTGAT
ACCATATTCT CCAATTTCTG CGTTGGAAAA TGA
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| Protein sequence | MDTIVAVATP PGKGAIAILR LSGPDSWKIV QKHLRTRSEI VPRKAIHGWI HENGEDVDEV
VVIFYKSPKS YTGEDMVEVM CHGGPLVVKK LLDLFLKSGA RMAEPGEFTK RAFLNGKMDL
TSAEAVRDLI EAKSETSLKL SLRNLKGGLK DFVESLRREL IEVLAEIRVE LDYPDEIETN
TGEVVTRLER IKEKLTKELK KADAGILLNR GFRMVIVGKP NVGKSTLLNR LLNEDRAIVT
DIPGTTRDVI SEEIVIRGIL FRIVDTAGVR SETNDLVERL GIERTLQEIE KADIVLFVLD
ASSPLDEEDR KILERIKNKR YLVVINKVDV VEKINEEEIK NKLGTDRHMV KISALKGEGL
EKLEEAIYRE TQEIFERGSD SLITNLRQKQ LLENVKGHLE DAIKSLKEGM PVDMASIDLE
RALSLLDEVT GRSFREDLLD TIFSNFCVGK
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