| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_0649 |
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| Symbol | |
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| ID | 5171706 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | - |
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| Start bp | 653756 |
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| End bp | 654712 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640563156 |
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| Product | periplasmic binding protein/LacI transcriptional regulator |
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| Protein accession | YP_001244245 |
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| Protein GI | 148269785 |
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| COG category | [K] Transcription |
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| COG ID | [COG1609] Transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.174613 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAAGAT TCAACGCCAG TCGGGAAACG GTGAGAAAGG CCCTTGAAAG ACTGGTAGTT
AAAAACCTGG TCATCAGAAA GCCAGGACTT GGAACGTTTG TGAACATAGA AAAGAAAAAC
AAGGTCGTTG GCATTCTTGT CCAGCAGATC ACAAGTTACA TATTTCCATA TATAGCACTC
GGCGCCGAAG AGGTTCTGTT TGCAAACGGG TACAAGATGC TTCTTGGAAA CGCTTCTGAG
GACCCTCACA AAGAGAGACA GATCATAAAC GAATGGCTGG AAGTTGGTGT GGATGGTCTA
ATAATAGACC CTGTCTACAG TGCCACCAAA CGCTCCAACA GAGATTTGAT AGGAGAAATA
GCAAAAAGAG GCACGAAGGT AGTTTTGGTA CACACCAACT GGGACATAGA GGGTGTGGGA
AGTGTTGTTC TCGACGACTG GTACGGAGGA GAAAAAGCAG CGGAGATATT TTATCAGTAC
GGACACAGGA ATGTGGCTGT GTTGTATAAA ACAATACACC TTCCCAGTGT TGTGAGAGCC
CAGGCCTTTC TGAAACGAGG GAGAGAACTC GGTTTTGAAA AAATCCACGA GAAATCTTTT
CACGTTTCAG AATTCACAGG TATCGTTATG CAAAGTGCCT TTGAACTCCT ATCTTTGCCG
AAAGATCAGC GTCCAACCGC AGTTTTCTGC TACAACGATG CAACGGCCCT TCAGTTTTTC
CTTGCAGCAA AAAGAATGGG TTTGAGTATA CCAGAAGACG TTTCTGTCAT AGGTTTCGAC
GATGCTCCCA TAGGTGATTT CAGAGAGATT CTGACCACTT TCGAACATCC CAAAGAAGAA
GTTGGAAAGA AGGCAGTTGA GATCCTTTTG AAGATGATCG ATGGTGAAAA GCCCGAGAAA
TATGTTTTCA AACCAAAACT CATCATGAGA GAGTCGGTGA CGTATCCAAA AAAATGA
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| Protein sequence | MERFNASRET VRKALERLVV KNLVIRKPGL GTFVNIEKKN KVVGILVQQI TSYIFPYIAL
GAEEVLFANG YKMLLGNASE DPHKERQIIN EWLEVGVDGL IIDPVYSATK RSNRDLIGEI
AKRGTKVVLV HTNWDIEGVG SVVLDDWYGG EKAAEIFYQY GHRNVAVLYK TIHLPSVVRA
QAFLKRGREL GFEKIHEKSF HVSEFTGIVM QSAFELLSLP KDQRPTAVFC YNDATALQFF
LAAKRMGLSI PEDVSVIGFD DAPIGDFREI LTTFEHPKEE VGKKAVEILL KMIDGEKPEK
YVFKPKLIMR ESVTYPKK
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