| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_0639 |
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| Symbol | |
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| ID | 5171357 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | + |
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| Start bp | 643236 |
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| End bp | 644663 |
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| Gene Length | 1428 bp |
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| Protein Length | 475 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640563146 |
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| Product | glycoside hydrolase family protein |
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| Protein accession | YP_001244235 |
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| Protein GI | 148269775 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3507] Beta-xylosidase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000000370471 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAATCC TTTTGATGGC TACTTTGTTT CTTATCTTGC CGAGTGGTTG TCTTGTTTTA
GGAATTGAGG ATAATATTCC AAGTTTCAGA TGGGCTACAG TCCACGATCC ATCTGTTATA
AAAGCTGGCG ATACTTTCTA CGTTTTTGGC TCACACCTTC AAATTGCCAA ATCGAACGAT
CTGATGCACT GGACACAGGT GAACGTAGGG GTTTATAACA ACAACCCCAT AATCCCAAAT
ATATTCACCG AGCTGAAAGA AACTTTCGAA TGGGCTGAAA CAAACACTCT TTGGGCACCC
CATGTGATTC AGCTTCAAGA TGGTAGGTAC TACTTCTACT ACTGTGCGTG CAGAGGAGAT
TCGCCACGAT CAGCAATGGG GATCGCAGTC TCCGATAACA TCGAGGGCCC TTACAGAAAC
CTCGGGATAA TTCTGCGATC TGGGTATCGC CCCGGAGAAG GAATGTGTGA AGAAGGAGTA
CCATACGATG CGAGAATCCA TCCAAACGTT GTGGATCCAC ATGTTTTTTA CGACAAAGAA
GGTAATCTTT GGATGGTTTA CGGGTCCTAC TCCGGTGGCA TTTACATACT AAAGCTCGAC
CCAGAGACGG GTTTTCCTCT CCCAGGACAG GGGTACGGAA AGAAACTCAC AGGAGGAAAT
CACAGCAGGA TCGAAGGTCC CTTTATCCTC TACAGTCCTG ATACAGATTA TTACTATCTC
TTTCTGAGCT TTGGAGGGCT CGACTACAGG GGAGGATACA ACATCAGGGT TGCAAGGTCC
AAAAACCCCG ACGGTCCTTA TTATGACGCA GAAGGTCGAA ACATGATAGA TTGTTACGGC
CCGTCGTTCC TGGAAGGCAA CGATCCTTAC ATAGCACCTT TCGGTGTGAA ACTGGTGGGT
AACTTCACCC TGAGCGAAGG AAACACCATA GACTTCCGAG TGTTCGGATA CGTATCTCCG
GGGCACAACT CTGCCTATTA CGATCCAAAA ACTGGGAAGT ACTTCATCTT CTTCCACACG
AGGTTCCCCG GCAGAGGAGA GACGTACCAG CTCAGGGTCC ATCAGCTCTT CCTCAACGAA
GACGGATGGT TCGTCATGGC TCCTTTCCCA TATGCCGGTG AGACCATTGA AGATCTATCT
TTTCAAGAGA TAGCAGGGGA ATATCAACTA TTAATACATG ATAAGGAAAT GACGAACGAG
ATAAGGAAAC CCGTGAGAAT CGCTCTGAAT CCGGACGGAA CTGTCACTGG AGCTCAGACT
GGTGAATGGG AGAAGAAGGG ACATTATATA ACTCTGAAAC TCGAAGGAGA GATCTACAAA
GGAGTGACCT TGAAACAGTG GCACTATTCC GAGAAAAAGT GGGTGACAGT GTTTTCCGCT
CTATCACAGA AGGGAGTTTC AGTGTGGGGT ATAAAAACTT CTGAGTAG
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| Protein sequence | MKILLMATLF LILPSGCLVL GIEDNIPSFR WATVHDPSVI KAGDTFYVFG SHLQIAKSND
LMHWTQVNVG VYNNNPIIPN IFTELKETFE WAETNTLWAP HVIQLQDGRY YFYYCACRGD
SPRSAMGIAV SDNIEGPYRN LGIILRSGYR PGEGMCEEGV PYDARIHPNV VDPHVFYDKE
GNLWMVYGSY SGGIYILKLD PETGFPLPGQ GYGKKLTGGN HSRIEGPFIL YSPDTDYYYL
FLSFGGLDYR GGYNIRVARS KNPDGPYYDA EGRNMIDCYG PSFLEGNDPY IAPFGVKLVG
NFTLSEGNTI DFRVFGYVSP GHNSAYYDPK TGKYFIFFHT RFPGRGETYQ LRVHQLFLNE
DGWFVMAPFP YAGETIEDLS FQEIAGEYQL LIHDKEMTNE IRKPVRIALN PDGTVTGAQT
GEWEKKGHYI TLKLEGEIYK GVTLKQWHYS EKKWVTVFSA LSQKGVSVWG IKTSE
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