Gene Tpet_0620 details

Gene Information

• Locus tag: Tpet_0620
• Symbol: leuD
• ID: 5170120
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermotoga petrophila RKU-1
• Kingdom: Bacteria
• Replicon accession: NC_009486
• Strand: -
• Start bp: 618905
• End bp: 619405
• Gene Length: 501 bp
• Protein Length: 166 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 640563127
• Product: 3-isopropylmalate dehydratase small subunit
• Protein accession: YP_001244216
• Protein GI: 148269756
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0066] 3-isopropylmalate dehydratase small subunit
• TIGRFAM ID: [TIGR02087] 3-isopropylmalate dehydratase, small subunit

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 0.0153606
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATAAGGG GAAGAGTCTG GAAATTCGGT GACAATATAT CGACTGACCA TATAGCACCT 
GGAAGGTATT TTCATCTGAG GAACAATCTT GAGGAGCTCG CAAAACACGT CTTGGAAGAT 
GCCATGGAGG ATTTCGCGAA GAAGGTGCAG AAAGGTGACA TCATCGTGGC TGGCAAGAAC 
TTCGGACTTG GTTCTTCCAG AGAGCACGCT GCGCGTATCA TAAAGATCGC TGGTGTTTCC 
TGTATCGTGG CGAAGTCTTT CGCAAGGATC TTCTACCGAA ACGCCATCAA TGTGGGACTT 
CCAGTCATAG AGCTCAAGGA AGTCGACGAG ATCAACCAGG GAGACGAACT TGAGATAGAT 
CTCGAAAACG GTGTTTTGAA GAACCTCACA ACAGGAAAAG AATACAGATT CACTCCGATT 
CCGAAGTTTC TCCTCGAGAT ACTGAAAGAA GACGGTATAG TGAACTATCT GAAAAAGCAC 
GGTTCCTTCC CAAGAGTTTA G 

 

Protein sequence

MIRGRVWKFG DNISTDHIAP GRYFHLRNNL EELAKHVLED AMEDFAKKVQ KGDIIVAGKN 
FGLGSSREHA ARIIKIAGVS CIVAKSFARI FYRNAINVGL PVIELKEVDE INQGDELEID 
LENGVLKNLT TGKEYRFTPI PKFLLEILKE DGIVNYLKKH GSFPRV