Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpet_0617 |
Symbol | |
ID | 5170262 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga petrophila RKU-1 |
Kingdom | Bacteria |
Replicon accession | NC_009486 |
Strand | + |
Start bp | 615905 |
End bp | 616561 |
Gene Length | 657 bp |
Protein Length | 218 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640563124 |
Product | putative translaldolase |
Protein accession | YP_001244213 |
Protein GI | 148269753 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0176] Transaldolase |
TIGRFAM ID | [TIGR00875] fructose-6-phosphate aldolase, TalC/MipB family |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.000452349 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGATCT TTCTGGACAC AGCAAACTTA GAAGAGATCA AAAAAGGTGT TGAATGGGGT ATCGTGGATG GAGTAACGAC GAATCCAACA CTGATTTCAA AGGAAGGAGC AGAGTTCAAA CAGAGAGTGA AAGAGATCTG CGATCTGGTG AAAGGTCCCG TTTCTGCGGA GGTTGTGTCT CTCGACTACG AAGGCATGGT GAGAGAGGCG AGAGAACTTG CCCAGCTCAG TGAATACGTG GTGATCAAGA TACCCATGAC ACCCGATGGG ATCAGAGCGG TGAAGACACT CTCTGCCGAA GGCATCAAGA CGAACGTGAC TCTGGTGTTC AGCCCAGCAC AGGCCATCCT CGCCGCCAAA GCGGGCGCAA CCTACGTGAG TCCCTTCATC GGAAGGATGG ACGACCTCTC GAACGATGGG ATGAGAATGC TCGGCGAAAT AGTCGAGATC TACGACAACT ACGGATTCGA GACGGAGATC ATCGCCGCAA GCATCAGACA TCCAATGCAC GTGGTGGAGG CAGCCCTCAT GGGTGTAGAC ATCGTGACGA TGCCCTTTGC TGTGCTTGAA AAGCTCTTCA AACACCCGAT GACAGATCTC GGTATAGAGC GTTTCATGAA CGACTGGAAG AAGTACCTGG AGAACCTGAA GAAATAA
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Protein sequence | MKIFLDTANL EEIKKGVEWG IVDGVTTNPT LISKEGAEFK QRVKEICDLV KGPVSAEVVS LDYEGMVREA RELAQLSEYV VIKIPMTPDG IRAVKTLSAE GIKTNVTLVF SPAQAILAAK AGATYVSPFI GRMDDLSNDG MRMLGEIVEI YDNYGFETEI IAASIRHPMH VVEAALMGVD IVTMPFAVLE KLFKHPMTDL GIERFMNDWK KYLENLKK
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