| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_0615 |
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| Symbol | |
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| ID | 5170953 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | - |
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| Start bp | 613977 |
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| End bp | 614750 |
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| Gene Length | 774 bp |
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| Protein Length | 257 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640563122 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001244211 |
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| Protein GI | 148269751 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.000368197 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAATATTC TTGAAAAGCT TTTCTCTTTG AAAAGAAGGG TTGCTATGGT GACAGGTGGG
GGGCAAGGAA TCGGGAAGGC CCTTGCTCAG GCGCTGGCAG CGGTGGGTGC AGCTGTTTTG
ATCATGGACA TAAACGAAGA AACAGCTAGA AGAACGGTCG AAGAGATAAA AGAAAAAGGT
GGTGAAGCAG ATTTCTATGT TGGAGATGTA ACGAAAGAAG AGGATTGTTT TGGAGCAGTC
AAAAAGGCGC TGGACAGATG GGGAAGACTC GACATAGGAG TCAACAACGC GGGGATAGGG
GACTGGTGCG AAGCTGAGAA CTACCCTGTT GAACGATGGA AAAAGGTAAT AGATGTGAAT
CTGGTTGGGG TGTTTCTTTC CGCAAAAGCG GAGTTCCACG CTATGAAGGA AAGAAAATAC
GGAAAGATCA TAAACATCGC GTCCATGTCC GGACACATCG TGAACAAACC TCAGAAGCAG
ACAGCTTACA ACGCTTCGAA AGCGGGTGTG ATCCATCTCA CCAGATCTCT GGCCGCCGAG
TGGGCCCCGT ACGGAATCAG GGTGAACAGC ATAAGCCCCG GATACATCAG AACACCTCTC
ATAGAATCTC CAAACGTGAA AGATCTTGTT CCCCTCTGGC TCGACATGAT CCCTCTTGGA
AGACTGGGAG AGGTGGACGA TCTGATAGGA GCTGCTATCT TCCTTGCAAG TCCCGCCTCA
GATTACATGA CAGGGCACGA TCTTGTGATA GACGGAGGCT ACACCGTCTG GTGA
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| Protein sequence | MNILEKLFSL KRRVAMVTGG GQGIGKALAQ ALAAVGAAVL IMDINEETAR RTVEEIKEKG
GEADFYVGDV TKEEDCFGAV KKALDRWGRL DIGVNNAGIG DWCEAENYPV ERWKKVIDVN
LVGVFLSAKA EFHAMKERKY GKIINIASMS GHIVNKPQKQ TAYNASKAGV IHLTRSLAAE
WAPYGIRVNS ISPGYIRTPL IESPNVKDLV PLWLDMIPLG RLGEVDDLIG AAIFLASPAS
DYMTGHDLVI DGGYTVW
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