| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_0607 |
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| Symbol | |
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| ID | 5171558 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | - |
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| Start bp | 601377 |
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| End bp | 603395 |
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| Gene Length | 2019 bp |
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| Protein Length | 672 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640563115 |
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| Product | Beta-galactosidase |
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| Protein accession | YP_001244204 |
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| Protein GI | 148269744 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1874] Beta-galactosidase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00254825 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGTAAATC CGAAACTTCC TGTGATCTGG TACGGAGGAG ACTACTACCC GGAACAGTGG
GACGAGGAAA CGTTCGAAAG AGATATCAGG ATGTTCAAAG AAGCAGGTAT CAACGTGGTC
ACCCTCGGGG TTTTCTCATG GAGTCTTATC CAACCAGACG AGAACACTTA CGATTTTTCG
TTCTTCGAAA AAGTGATGGA TCGTCTGTAC AAAGAAGGTA TCTATGTCTG TCTTGCAACT
CCCACATCCG CTCCCCCTCA CTGGATGACG CAGAAATACC CTGAAATCCT TCTCACAGAC
GTGAACGGTG TAAAGCGAGA GAAGGGAGGC AGACAGAACT TTTGTCCCAA CAGTGAGAAG
TACAGATATT TTGCAAGAAA CATCGCAGAG AAACTCGCAG AACATTTCAA GGATCACCCT
GCTCTCGTTC TTTGGCACGT GAACAACGAA TATTTGAACT ACTGCTACTG TGATATCTGC
AGGGGGAAGT TTCAGAATTG GTTGAAGGAA AAGTACGGCA CACTCGATGA ATTGAACAGA
AGATGGAACA CGCGTTTCTG GTCCCAGACC TTCACCGCCT GGGAAGAGAT TCCTGTTCCA
ACAACGAGAA GTGTTCTCTT CTGGAGAAAG GACAGGTATC AATCTGTTCT TCCGGAACTT
TATCTGGATT ACAGACGCTT CATGACACAG AGTATGCTCG AGTGTTTCCT GGAGGAATAC
AGGGCAATAA AGAAACACAC TCCAGACATA CCCGTCACCA CGAATCTGAT TGCGGCAACT
TTCAAGGAGT GGAACTATTT CGAATGGGCG AATCATATGG ACGTTGCAGC ATGGGACAAC
TATCCCGGTT ACAAAGAAGA TTTCTCCGTG ATTTCTTTGA GACACTCTCT GATACGCGGT
TTGAAAGAAG GAAAACCCTT CGTCCTAATG GAACAGTCTC CTTCGCAGGC GTGCTGGAGA
TGGTACAATC CCCAGAAAAG ACCAGGAGAG ATGAGGCTCT GGAGTTATCA CGCTCTCGCT
CACGGTGCAG AGACTCTCAT GTTCTTTCAG CTGAGACAAT CAAAGGGAGG AGTAGAAAAA
TTCCACGGGG CTGTTATCAC GCATGTCGAC AGTCCGAACA CAAGGGTCTT TCAAGAAGTG
AAAAGAGTGG GAGAAGAGAT AAAGTCCTTA TCGGATATTC TCGACACAAG GGTTGTCTCA
CAGACTGCTC TTCTTTTCGA CTGGGAAAGC TGGTGGGCGA TGGAAGACAC TCTGACACCG
AACATAGACT TCAAGTACCT GAACGAAGCA GAAAAGTATT TCAAGGCACT TGTGAAAACC
GGCCTTGGAG TCGATGTTGT TGGTAAAGAT CAGAATTTTG AGGGATACAG GATCATCGTT
GCTCCGGCGC TTTACATGGT GGACGAAGAA CTTGCACGGA AGCTGAAAGA TTACGTCTCG
AACGGAGGAA TCTTGATCCT CACAACAATG AGCGGTATTG TCGATGAAGA CGATCAGGTT
GTTCTGGGAG GTTATCCAGG TTATCTTCGC GATCTTATGG GGGGCTATGT GGAAGAAATA
GATGCTTTGC CACCTGAGGA GAAAAACGAA ATCTTGATGT TTGGCAAAAG GTACGAGTGT
AGTTTGGTGT TTGACTACAT AAAAACCACC ACAGCGGAAG TGCTCGGAAG ATTTGGAAGG
GACTATTACA TGAACGAACC TGCCGTGTTG AGAAACAGAT ACGGTGGTGG ATGGGTTTAC
TACGTAGGTT CTTCCGCGTC TTTCGATCTT GTATGGGATC TTGTGAAGTT CATAGAGAGA
GAACACAATC TCAGAGCAGA GATCACACCG CCAGATGGTG TAGAGGTGAT AAAGAAAGTC
AAAGGAGAGA AGACCTTCTA CTTTCTCTTC AATCACTCTC ATGAACCGCA GATCGTTGAC
TTGCCGGAAG GAACGTTCAG GGATCTGATC AAAGGAAATT TGTATGAAAA AAAGGCAAGA
CTGCAACCGC TCGATGTCTT GATCCTTCTG AAAGAGTGA
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| Protein sequence | MVNPKLPVIW YGGDYYPEQW DEETFERDIR MFKEAGINVV TLGVFSWSLI QPDENTYDFS
FFEKVMDRLY KEGIYVCLAT PTSAPPHWMT QKYPEILLTD VNGVKREKGG RQNFCPNSEK
YRYFARNIAE KLAEHFKDHP ALVLWHVNNE YLNYCYCDIC RGKFQNWLKE KYGTLDELNR
RWNTRFWSQT FTAWEEIPVP TTRSVLFWRK DRYQSVLPEL YLDYRRFMTQ SMLECFLEEY
RAIKKHTPDI PVTTNLIAAT FKEWNYFEWA NHMDVAAWDN YPGYKEDFSV ISLRHSLIRG
LKEGKPFVLM EQSPSQACWR WYNPQKRPGE MRLWSYHALA HGAETLMFFQ LRQSKGGVEK
FHGAVITHVD SPNTRVFQEV KRVGEEIKSL SDILDTRVVS QTALLFDWES WWAMEDTLTP
NIDFKYLNEA EKYFKALVKT GLGVDVVGKD QNFEGYRIIV APALYMVDEE LARKLKDYVS
NGGILILTTM SGIVDEDDQV VLGGYPGYLR DLMGGYVEEI DALPPEEKNE ILMFGKRYEC
SLVFDYIKTT TAEVLGRFGR DYYMNEPAVL RNRYGGGWVY YVGSSASFDL VWDLVKFIER
EHNLRAEITP PDGVEVIKKV KGEKTFYFLF NHSHEPQIVD LPEGTFRDLI KGNLYEKKAR
LQPLDVLILL KE
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