| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_0604 |
|---|
| Symbol | |
|---|
| ID | 5171783 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermotoga petrophila RKU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009486 |
|---|
| Strand | - |
|---|
| Start bp | 598783 |
|---|
| End bp | 599742 |
|---|
| Gene Length | 960 bp |
|---|
| Protein Length | 319 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 640563112 |
|---|
| Product | aldo/keto reductase |
|---|
| Protein accession | YP_001244201 |
|---|
| Protein GI | 148269741 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0667] Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) |
|---|
| TIGRFAM ID | [TIGR01293] voltage-dependent potassium channel beta subunit, animal |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.00000106884 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAGTACA GGAAGGTTGG AAAATGGGGT ATCAAGATCA GCGAACTTTC ACTCGGATCG
TGGCTCACTT TTGGAAAACA ACTCGATCTG GACATGGCCA CCGAGGTTGT GAAAAAAGCG
TTCAACAGTG GGATAAACTT CTTCGACACG GCAGAGGCGT ATGCGGGTGG AATAGCGGAG
GCGATGCTTG GGAAAATACT CAAGAACTTC AGAAGAGAAG ACCTCGTCGT TTCCACGAAG
ATCTTCTGGG GTGGAAGTGG CCCGAACGAT CTGGGGCTTT CGAAGAAGCA TCTTCTCGAG
GGGACCTGGA ACTCTTTGAA GAGGCTTCAG ATGGACTATG TGGATATCCT CTACTGTCAC
AGACCCGATC CGAACGTTCC CATGGAAGAA GTTGTCTTCG CGATGGACTA CATTTTGAGA
GAAGGGCTTG CACTCTACTG GGGAACCTCT GAGTGGAGTG CAAAGGAGAT AGAGGAAGCG
CACAGGGTTT GTAAGGAACT AGGCGTCATG CCTCCCATCG TGGAGCAACC GCAGTACAAC
ATGTTCGTGA GAGAAAGGGT GGAAAAGGAG TACGCACCTC TCTACGAAAA GTACGGCATG
GGGCTGACTA CTTATTCACC TCTCGCGTCT GGCCTTCTTT CTGGAAAATA CAACAACGGA
ATTCCAGAGA ATTCAAGACT TGCCACGTTC CCGCAGGTGA GGAAGTGGCT TGAAGAGGGA
GGTCTTCTCA ACGAAAAAAC CTTCGAAAAG CTCAGAAAAC TCCAGAATAT AGCGGACCAG
CTCGGAGCGA GCCTTCCACA GCTTGCCATC GCGTGGATCT TGAAAAACAA AAACGTCAGC
AGTGTCATTC TCGGAGTGAG CAGACCAGAA CAGCTCGAAG AGAACCTGAA AGCAGTCGAG
ATCAAAGAAA AACTCACAGA TGAAGTAATG GAAGAGATAG AAAAGATCCT GAATGAATAA
|
|---|
| Protein sequence | MEYRKVGKWG IKISELSLGS WLTFGKQLDL DMATEVVKKA FNSGINFFDT AEAYAGGIAE
AMLGKILKNF RREDLVVSTK IFWGGSGPND LGLSKKHLLE GTWNSLKRLQ MDYVDILYCH
RPDPNVPMEE VVFAMDYILR EGLALYWGTS EWSAKEIEEA HRVCKELGVM PPIVEQPQYN
MFVRERVEKE YAPLYEKYGM GLTTYSPLAS GLLSGKYNNG IPENSRLATF PQVRKWLEEG
GLLNEKTFEK LRKLQNIADQ LGASLPQLAI AWILKNKNVS SVILGVSRPE QLEENLKAVE
IKEKLTDEVM EEIEKILNE
|
|---|
| |