Gene Tpet_0588 details

Gene Information

• Locus tag: Tpet_0588
• Symbol: pyrE
• ID: 5170672
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermotoga petrophila RKU-1
• Kingdom: Bacteria
• Replicon accession: NC_009486
• Strand: +
• Start bp: 585782
• End bp: 586345
• Gene Length: 564 bp
• Protein Length: 187 aa
• Translation table: 11
• GC content: 51%
• IMG OID: 640563095
• Product: orotate phosphoribosyltransferase
• Protein accession: YP_001244185
• Protein GI: 148269725
• COG category: [F] Nucleotide transport and metabolism
• COG ID: [COG0461] Orotate phosphoribosyltransferase
• TIGRFAM ID: [TIGR00336] orotate phosphoribosyltransferase; [TIGR01367] orotate phosphoribosyltransferase, Thermus family

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 0.0256726
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGATAAAGG AAATCCTCGA GAAAACCGGT GCTTTGATGG AGGGGCACTT CATTCTCTCT 
TCCGGGAAAC ACTCCTCAAG ATACGTGCAG TGCGCACGTC TTTTCGAGTT CCCAGAGTAC 
GGCGACATCG TGGGAGAAGA ATTAGCAAAG CTTCTGAGGA AGTACGATGT GGAAACAGTA 
GTGGGTCCTG CGATGGGAGG AGTGATACTC TCGTACGTCG TCGCAAGGTA CCTGAAAGCG 
AGGTCGTTGT TCGCGGAAAG AGAAAACGGA GTGATGAAAC TCAGAAGGGG CTTTTTCGTA 
AGACCTGGTG AGAAAGCAGC GGTAGTTGAA GACGTGGTGA CCACGGGTGG TTCTGTGAAG 
GAAGTGATAG AGCTCTTGAA AGAGTATGGA GCAAACGTGG TGTGTGTGGG TTCCATCATC 
GATCGCTCCG GCGGAAAAGT GGACTTTGGA GTTCCGTTCG AAAGTCTTCT GAAGCTCGAC 
CTTCCGGTCT ACGATCCTGA AGACTGTCCA CTCTGCAAAC AGGGAATCCC GGCAGAAAAA 
CCGGGAAGCA GGGGGTTGAA ATGA 

 

Protein sequence

MIKEILEKTG ALMEGHFILS SGKHSSRYVQ CARLFEFPEY GDIVGEELAK LLRKYDVETV 
VGPAMGGVIL SYVVARYLKA RSLFAERENG VMKLRRGFFV RPGEKAAVVE DVVTTGGSVK 
EVIELLKEYG ANVVCVGSII DRSGGKVDFG VPFESLLKLD LPVYDPEDCP LCKQGIPAEK 
PGSRGLK