Gene Tpet_0580 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpet_0580 
Symbol 
ID5171229 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga petrophila RKU-1 
KingdomBacteria 
Replicon accessionNC_009486 
Strand
Start bp578917 
End bp579300 
Gene Length384 bp 
Protein Length127 aa 
Translation table11 
GC content48% 
IMG OID640563087 
Producthypothetical protein 
Protein accessionYP_001244177 
Protein GI148269717 
COG category[S] Function unknown 
COG ID[COG3877] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.440494 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGCCCA AGTGTCCGGT CTGCGGAAAA GAAATGATAG TTACAGAGCT TCACTGCAAA 
AGAGACGATG TCACTGTGCG GGGACATTTC AAAGCGAGCC CGTTCGATTT TCTCGACAAA
GATGAACTCG AGTTCGTGAT TCTATTCTTC AAGGCGCGTG GGAATTTGAA GGAGATAGAG
CGTTACACAG GACAGGGCTA TTTCGCCTTG AGGGGGAAGC TGGAGAGAAT CCTGGAGAAG
ATGAATCTCC AACCCCTTGG AGAAGTGGAG GAAGAAGCTG CAGAAGAGGA TCTCTTCAAG
CAGGTGAAAG AAGGGAAGAT CAGCGTTGAG GAAGCTTTGG AAATTCTGAA GAAGAGGAAA
AAAGGAGGAG AGAGCGATGT CTGA
 
Protein sequence
MLPKCPVCGK EMIVTELHCK RDDVTVRGHF KASPFDFLDK DELEFVILFF KARGNLKEIE 
RYTGQGYFAL RGKLERILEK MNLQPLGEVE EEAAEEDLFK QVKEGKISVE EALEILKKRK
KGGESDV