Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpet_0577 |
Symbol | |
ID | 5170471 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga petrophila RKU-1 |
Kingdom | Bacteria |
Replicon accession | NC_009486 |
Strand | - |
Start bp | 575714 |
End bp | 576730 |
Gene Length | 1017 bp |
Protein Length | 338 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640563084 |
Product | 3-deoxy-7-phosphoheptulonate synthase |
Protein accession | YP_001244174 |
Protein GI | 148269714 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2876] 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase |
TIGRFAM ID | [TIGR01361] phospho-2-dehydro-3-deoxyheptonate aldolase |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00134073 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATAGTCG TTTTGAAACC CGGTTCCACA GAAGAAGATA TAAGGAAGGT GGTGAAGTTG GCTGAGAGTT ACAACTTGAA GTGTCACATT TCCAAAGGTC AGGAAAGAAC GGTTATTGGG ATCATCGGGG ACGATAGGTA CGTGGTGGCG GACAAGTTCG AATCTTTGGA CTGTGTGGAA AGCGTTGTGA GGGTGCTCAA GCCTTACAAA CTCGTCTCTC GTGAGTTCCA TCCGGAGGAC ACGGTGATCG ACCTCGGAGA TGTGAAGATA GGAAACGGCT ACTTCACCAT CATAGCGGGA CCGTGCTCAG TTGAGGGCAG GGAAATGCTC ATGGAAACCG CGCACTTTTT GAGCGAACTC GGTGTCAAGG TTTTGAGGGG AGGGGCTTAC AAGCCTCGAA CATCTCCTTA CTCTTTCCAA GGACTCGGAG AGAAAGGGTT GGAGTACCTG AGAGAAGCTG CCGACAAGTA CGGTATGTAC GTGGTGACGG AGGCTCTCGG AGAAGACGAT CTTCCAAAAG TGGCCGAGTA CGCTGATATC ATTCAGATAG GAGCGAGAAA CGCTCAGAAC TTCAGATTGC TCTCTAAAGC GGGAAGCTAC AACAAACCCG TTCTTCTGAA AAGGGGTTTC ATGAACACCA TCGAAGAGTT CCTTCTCTCC GCTGAATACA TCGCAAACTC TGGAAACACG AAGATCATAC TGTGTGAAAG GGGAATCAGA ACGTTCGAAA AGGCCACGAG GAACACACTC GATATATCCG CTGTTCCTAT AATCAGAAAG GAATCCCATC TTCCCATTCT GGTGGATCCG AGCCACTCTG GGGGAAGAAG AGACCTCGTT ATTCCACTCT CCCGGGCCGC TATAGCGGTT GGAGCTCATG GAATCATTGT GGAGGTTCAT CCGGAGCCGG AGAAGGCACT TTCGGATGGA AAACAGAGTC TTGACTTCGA GCTCTTCAAG GAACTGGTTC AGGAAATGAA GAAACTCGCT GATGCCCTGG GGGTGAAGGT GAATTGA
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Protein sequence | MIVVLKPGST EEDIRKVVKL AESYNLKCHI SKGQERTVIG IIGDDRYVVA DKFESLDCVE SVVRVLKPYK LVSREFHPED TVIDLGDVKI GNGYFTIIAG PCSVEGREML METAHFLSEL GVKVLRGGAY KPRTSPYSFQ GLGEKGLEYL REAADKYGMY VVTEALGEDD LPKVAEYADI IQIGARNAQN FRLLSKAGSY NKPVLLKRGF MNTIEEFLLS AEYIANSGNT KIILCERGIR TFEKATRNTL DISAVPIIRK ESHLPILVDP SHSGGRRDLV IPLSRAAIAV GAHGIIVEVH PEPEKALSDG KQSLDFELFK ELVQEMKKLA DALGVKVN
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