Gene Tpet_0577 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpet_0577 
Symbol 
ID5170471 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga petrophila RKU-1 
KingdomBacteria 
Replicon accessionNC_009486 
Strand
Start bp575714 
End bp576730 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content50% 
IMG OID640563084 
Product3-deoxy-7-phosphoheptulonate synthase 
Protein accessionYP_001244174 
Protein GI148269714 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2876] 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase 
TIGRFAM ID[TIGR01361] phospho-2-dehydro-3-deoxyheptonate aldolase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00134073 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAGTCG TTTTGAAACC CGGTTCCACA GAAGAAGATA TAAGGAAGGT GGTGAAGTTG 
GCTGAGAGTT ACAACTTGAA GTGTCACATT TCCAAAGGTC AGGAAAGAAC GGTTATTGGG
ATCATCGGGG ACGATAGGTA CGTGGTGGCG GACAAGTTCG AATCTTTGGA CTGTGTGGAA
AGCGTTGTGA GGGTGCTCAA GCCTTACAAA CTCGTCTCTC GTGAGTTCCA TCCGGAGGAC
ACGGTGATCG ACCTCGGAGA TGTGAAGATA GGAAACGGCT ACTTCACCAT CATAGCGGGA
CCGTGCTCAG TTGAGGGCAG GGAAATGCTC ATGGAAACCG CGCACTTTTT GAGCGAACTC
GGTGTCAAGG TTTTGAGGGG AGGGGCTTAC AAGCCTCGAA CATCTCCTTA CTCTTTCCAA
GGACTCGGAG AGAAAGGGTT GGAGTACCTG AGAGAAGCTG CCGACAAGTA CGGTATGTAC
GTGGTGACGG AGGCTCTCGG AGAAGACGAT CTTCCAAAAG TGGCCGAGTA CGCTGATATC
ATTCAGATAG GAGCGAGAAA CGCTCAGAAC TTCAGATTGC TCTCTAAAGC GGGAAGCTAC
AACAAACCCG TTCTTCTGAA AAGGGGTTTC ATGAACACCA TCGAAGAGTT CCTTCTCTCC
GCTGAATACA TCGCAAACTC TGGAAACACG AAGATCATAC TGTGTGAAAG GGGAATCAGA
ACGTTCGAAA AGGCCACGAG GAACACACTC GATATATCCG CTGTTCCTAT AATCAGAAAG
GAATCCCATC TTCCCATTCT GGTGGATCCG AGCCACTCTG GGGGAAGAAG AGACCTCGTT
ATTCCACTCT CCCGGGCCGC TATAGCGGTT GGAGCTCATG GAATCATTGT GGAGGTTCAT
CCGGAGCCGG AGAAGGCACT TTCGGATGGA AAACAGAGTC TTGACTTCGA GCTCTTCAAG
GAACTGGTTC AGGAAATGAA GAAACTCGCT GATGCCCTGG GGGTGAAGGT GAATTGA
 
Protein sequence
MIVVLKPGST EEDIRKVVKL AESYNLKCHI SKGQERTVIG IIGDDRYVVA DKFESLDCVE 
SVVRVLKPYK LVSREFHPED TVIDLGDVKI GNGYFTIIAG PCSVEGREML METAHFLSEL
GVKVLRGGAY KPRTSPYSFQ GLGEKGLEYL REAADKYGMY VVTEALGEDD LPKVAEYADI
IQIGARNAQN FRLLSKAGSY NKPVLLKRGF MNTIEEFLLS AEYIANSGNT KIILCERGIR
TFEKATRNTL DISAVPIIRK ESHLPILVDP SHSGGRRDLV IPLSRAAIAV GAHGIIVEVH
PEPEKALSDG KQSLDFELFK ELVQEMKKLA DALGVKVN