| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_0567 |
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| Symbol | |
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| ID | 5170888 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | + |
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| Start bp | 565261 |
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| End bp | 566268 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640563074 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001244164 |
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| Protein GI | 148269704 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAAAAAGT GGATAACCCT GCTGATCATA GCAGTACTGG TGGTCCTGGT GATCGTTGTG
ATCTTTTTGA ACAGAGCCAG TGCCCAGACC GTTTCTGAAA AAGACGCCAC TTCAACACAG
GCTCCTGTCT ATCTCACCTA CACTGTGACG AAAGAGAATG AAACTGTAGA AATAGTGGGT
CAGGTCACCG CCGATACGAA GAAAGTCACT TCCAAAGTAT CTGGAGACGT TCTGGAAATT
TACGTGGAAG AGGGAGATGT GGTTCAGGTA GGTCAGAAAA TAGCAAAGAT AGACGACACA
GATTATCAAA TCAGTTATCT TTCCGCTCTC AACAGCTACA AAACTTCTCC CACCGAGATC
AACCGTTTGA ATCTGGAGAA AGCAAAAGAG AACCTGGAGA ACACAACGGT GGTTTCGCCT
GTGAATGGAG TAGTTCAATC GGTCAATGTG GATGTGGGAG ACAGAGTATC AGTTGGTACC
AGCATAGTCA CGATAGTGGA AACAGATACC CTCAGGGTGG AAGGTTCCAT CAGTGAATAC
GACCTCAAGA ACGTTAAAGA AGGAATGAAG GCTGTCTTCA CCTTCGAACA GCTTGGCCTC
ACCCTGACCG GAAAGGTGAA AAGAATCAGT CCTGTTGCGG AAACGTCCGG TGGAGTTACC
GTGATACCGG TGGAGTTTTC TTTCGATCAG ATACCTCCCA GCTTAGTGAT ACCTGGTCTC
ACGTGCGACG TGGAAATAAT CATCAAAGAA GCTACAAGTT CTTTCTTTGT ACCAAAAGAA
GCGGTCAGTC AGGATCAAAA CGGTTACTAC GTGATGAAAC AAACACCCCA AGGACCTCAA
AAGGTGTATG TTGAGGTGGG TGAAGAGCTG AACGATAAGA TAGAAATCAA AAAGGGTGTT
TCCGAAGGAG ACGTTTTGCT TCTCATCCCG TCACAGCAGG AAATCCAGAG ACTTCGAACA
AGACAAGGTC TTCCAATGTT CGGCCCCGGA GGGGGACGAG CAAGATGA
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| Protein sequence | MKKWITLLII AVLVVLVIVV IFLNRASAQT VSEKDATSTQ APVYLTYTVT KENETVEIVG
QVTADTKKVT SKVSGDVLEI YVEEGDVVQV GQKIAKIDDT DYQISYLSAL NSYKTSPTEI
NRLNLEKAKE NLENTTVVSP VNGVVQSVNV DVGDRVSVGT SIVTIVETDT LRVEGSISEY
DLKNVKEGMK AVFTFEQLGL TLTGKVKRIS PVAETSGGVT VIPVEFSFDQ IPPSLVIPGL
TCDVEIIIKE ATSSFFVPKE AVSQDQNGYY VMKQTPQGPQ KVYVEVGEEL NDKIEIKKGV
SEGDVLLLIP SQQEIQRLRT RQGLPMFGPG GGRAR
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