Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpet_0551 |
Symbol | |
ID | 5170877 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga petrophila RKU-1 |
Kingdom | Bacteria |
Replicon accession | NC_009486 |
Strand | - |
Start bp | 549828 |
End bp | 550505 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640563058 |
Product | hypothetical protein |
Protein accession | YP_001244148 |
Protein GI | 148269688 |
COG category | [S] Function unknown |
COG ID | [COG2013] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR00266] conserved hypothetical protein TIGR00266 |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0000000146225 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAGTACG AAATCGTACT GAAAGGTAGC TACGCTCTTT TGAAGGTGTT TCTTTCGATT GGGGAGAGTG TTGTGGTAGA ACCGGGTGCG ATGGTTTACA TGAAAGGACC CATCGAAGTT AACACTTCAG CAACGGGAGG TGTCTGGAAA GCCCTCAAAA GAGCCATTTT GGGCGGGGAG AACTTTTTCA TGAACACGTA CATCTCCCGC GGAGAAAGTG AAGTCGGTCT GGCTCCTCAG CTTCCGGGAG ATATAGACGT GATACCTTTG AAAGATGTTC TTTACGTTCA ATCGACCTCC TTTCTGGCGT GTGATCCTTC TGTGGAAATG GATGTTTCCT TTGGTGGTTT GAAATCCTTC TTCTCCGGTG AAGGAATATT TCTCTTGAAA TTCTTTGGTT ACGGTGATGT GGCCGTTTCC TCTTTTGGAG GAATAAAATC GATAGAGCTC AAGCCGGGAG AAGAGTTCAC CGTTGACACA GGACATGTCG TGGCGTTCGA TGGAACGGTG AAGTGGAACG TCAGAACATT TGGTGGCCTG AAATCCACAC TCTTCGGTGG AGAAGGTCTG GTGTGTACCT TCACAGGCCC AGGAAGAATT TATGTCCAGA CGAGGAATTA TCCCGCTTTT GTCGAGTGGA TAAAGTCTCT TGTTCCTAGG CAGACGGGTA GTAGGTGA
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Protein sequence | MKYEIVLKGS YALLKVFLSI GESVVVEPGA MVYMKGPIEV NTSATGGVWK ALKRAILGGE NFFMNTYISR GESEVGLAPQ LPGDIDVIPL KDVLYVQSTS FLACDPSVEM DVSFGGLKSF FSGEGIFLLK FFGYGDVAVS SFGGIKSIEL KPGEEFTVDT GHVVAFDGTV KWNVRTFGGL KSTLFGGEGL VCTFTGPGRI YVQTRNYPAF VEWIKSLVPR QTGSR
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