| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_0539 |
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| Symbol | |
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| ID | 5171422 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | - |
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| Start bp | 534305 |
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| End bp | 535390 |
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| Gene Length | 1086 bp |
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| Protein Length | 361 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640563046 |
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| Product | ABC-2 type transporter |
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| Protein accession | YP_001244136 |
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| Protein GI | 148269676 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0842] ABC-type multidrug transport system, permease component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGGCATC TTGTTGTTTC CATTCTGAAA AACGATTACT TCAGAACTAA GAGCGTTCTT
TTTTGGAATT TCCTTTTTCC AATACTCCTC TATCTCATTC TCGTATCCAT CTTCGGAGAT
ATGTCTTCTA ACATGAACCT GAGGATAGGA CTTGTGGGAG AGAGTAGTTT GGTAGAGAGT
GTGTTCAGCC ATCTCCCATC CGGTATCGAG ATCATCAGAA CACAGAACCC TGAAAGAGAC
CTCAAATACG GAAAGATCGA TGTTTGTGTG ATTCTACCGG AGAACTTCGA CAATCTCTTC
ACAAAAGCTA TCATCTTTTC CAAAACGAAG ATCTCTGTTC CTGTAGAGAT CACCATTCTC
TACGCTCCGG AGAGGCAGGA ATCCATTGTC CTTGCGAACG TTGTTTCTAA CATACTCGAG
TCGCTCGACC TTCAACTAAG AAAGGTAAAG GAGGTAGAAG TGGAGTACAG AAAAAAAGAA
AGGCAGGCTA TCAATTACTC TCACTACATT CTTCCTGCCG TTCTTCTTGT GGGTGTGATG
TCCGTCGGCC TCTTCACTGT TCCGTATCAG CTCGCTCTCT ACAGAGAGCA GGGAATTTTG
AAAAGAATCC TCGCTTCTCC ACTGAGAGGT CATCACTACT TTTTCTCCAT AGTCGTCTGC
GGACTTTTTG CCATGTCCAT CACTTCCGCT TCTGTGACGC TCTTTGCACG TTTTGTGTAC
GGAGTAGAGT TCCCCATCAA TGTATCCTTC TTAGGCGGTG TGCTTCTTTC CTTTCTTACG
TTTCTGAGTG TGTCTCTGCT CATGGTGTCT CTGTTCAAAA CCTTCTCCGC TTTGAGAGCA
GCTTCGCAGG TGTTCAACCA GGTGTTCATG TTCCTCGGAG GTTTTTACTT CGATGTCTCC
GGAATTCCTT GGCCGATCAA AGCGGTTGTT CTTGGAAATC CTGCAACCTA CTTGGTGGAT
TATCTGAGGG GATCTTTCGG ATACAGAACG ATTTACTCGA ATCACTTTTT AGTGCCGATC
GTGTGGATAG TACTCTCTTT AGTTCTCTTT TTTTTGAACT GGAGGAGGGT GATGATGGTT
GAGTGA
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| Protein sequence | MRHLVVSILK NDYFRTKSVL FWNFLFPILL YLILVSIFGD MSSNMNLRIG LVGESSLVES
VFSHLPSGIE IIRTQNPERD LKYGKIDVCV ILPENFDNLF TKAIIFSKTK ISVPVEITIL
YAPERQESIV LANVVSNILE SLDLQLRKVK EVEVEYRKKE RQAINYSHYI LPAVLLVGVM
SVGLFTVPYQ LALYREQGIL KRILASPLRG HHYFFSIVVC GLFAMSITSA SVTLFARFVY
GVEFPINVSF LGGVLLSFLT FLSVSLLMVS LFKTFSALRA ASQVFNQVFM FLGGFYFDVS
GIPWPIKAVV LGNPATYLVD YLRGSFGYRT IYSNHFLVPI VWIVLSLVLF FLNWRRVMMV
E
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