Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpet_0511 |
Symbol | |
ID | 5170321 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga petrophila RKU-1 |
Kingdom | Bacteria |
Replicon accession | NC_009486 |
Strand | - |
Start bp | 506691 |
End bp | 507506 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640563018 |
Product | peptidase M23B |
Protein accession | YP_001244109 |
Protein GI | 148269649 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.119076 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGAGAG GCTTCTTTTT GCTTTTTCTT GTTGTCTTTT TCGTACACGG ATTCTCATCC TACTTCCTGA TTCATTACAA GGTCCAGAAG AACGACACCC TTTACAGTAT ATCCCTCAAC TTTGGGATTT CCCCCTCTCT TCTTCTTGAC TGGAATCCCG GACTCGACCC TCACAATCTC AGAGTGGGGC AGGAGATCGT GATTCCTCAG CCGCCTGGCT ACCTCTACAC AGTAAAAAAA GGAGACACCC TCGATACTAT TGCAAAAAGG TTCTTCACAA CCGCTACTTT CATAAAGGAA GCGAATCAGC TCAAGTCTTA CACCATATAT GCGGGACAGA AGCTGTTCAT ACCTGAAAGT ATCATTGGAA AGGCGTTCAA CGATGAGAAA TTCTTCATCT GGCCTGTTTA TGGTGTCATT TCCTCCGGTT TTGGCTGGAG GATTCACCCC ATAACCGGGA AATATTCCTT TCACTCAGGA ATTGATATAT CGGCACCTGA GGGTACACCC ATATTCGCTG CTGAAAGCGG AGTGGTGGAG TTCGCCGGGG AAAACGGCGG GTACGGTCTC ATGATAAAAA TAAAATCTGC TTCTTACGAA CACATATACG GGCATCTTTC CCAAATAGAT GTATACGAGG GTCAGTACGT AAAGAAAGGT CAGATAATAG GAAGGGTTGG AAACACCGGT TTGAGTACAG GGCCTCACCT TCATTTCGAG GTTAGAGTGA ATGAGAAAGC CGTGAATCCG ATCAATTACC TGCCAAACCA GATCTGGGTG TTGAAAAAAG AACTCATAGG AACCGGTGGA GAATGA
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Protein sequence | MKRGFFLLFL VVFFVHGFSS YFLIHYKVQK NDTLYSISLN FGISPSLLLD WNPGLDPHNL RVGQEIVIPQ PPGYLYTVKK GDTLDTIAKR FFTTATFIKE ANQLKSYTIY AGQKLFIPES IIGKAFNDEK FFIWPVYGVI SSGFGWRIHP ITGKYSFHSG IDISAPEGTP IFAAESGVVE FAGENGGYGL MIKIKSASYE HIYGHLSQID VYEGQYVKKG QIIGRVGNTG LSTGPHLHFE VRVNEKAVNP INYLPNQIWV LKKELIGTGG E
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