| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_0504 |
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| Symbol | |
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| ID | 5171693 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | - |
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| Start bp | 500178 |
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| End bp | 500990 |
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| Gene Length | 813 bp |
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| Protein Length | 270 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640563011 |
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| Product | xylose isomerase domain-containing protein |
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| Protein accession | YP_001244102 |
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| Protein GI | 148269642 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1082] Sugar phosphate isomerases/epimerases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0000275929 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTGAAAC TCTCTCTGGT AATCAGCACC TCTGATGCTG CCTTTGACGC ACTGGCTTTC
AAAGGAGACC TGAAAAAAGG AATGGAACTT GCAAAAAGAA TCGGCTATCA GGCGGTGGAG
ATCGCTGTCA GAGACCCTTC TGTTGTGGAT TGGAACGAGG TAGCCAGGCT CTCAAAGGAG
CTGAGTCTTC CTATCTGTGC CATAGGAACT GGTCAGGCGT TCCTCGCTGA TGGGCTTTCT
CTAACACATC CGGATGAGAA GATCAGAAAA AAGTCGATCG AGAGGGTCAA GAAACATGCG
GAAGTTGCAG AGTCATTCGG AGCATTTGTT ATTATCGGCC TTGTTCGTGG AAAAAGGGAA
GGAAGGCCAT ATCGAGAGGT AGAAAAACTC TTCCTTGAAA GTATGAACTC TTTACTGAGC
GATACAAAAG AAGTGAGATT CGTCATAGAG CCTCTCAACA GGTACGAGTC AGATTTCATA
AACACCGTTG AAGAGGCACT GAGGGTGATT GAAAAAATCA ACTCTGACAG GGTGGGAATT
CTCGCAGACA CCTTCCACAT GAACATAGAG GAGGTAAACA TTTCAGAGAG TCTGAAAGTA
GCGGGAAAGA AACTGTACCA CTTCCATGTG GCAGACAGCA ACCGATGGGC ACCGGGATGC
GGACACTTTG ATTTTGAAAG CACTTTCAAA ACCCTGAAAG AGATTGGCTA CGATGGATAC
ATCTCCGTTG AGTGTCTTCC TCTTCCGGGA GGGATGGAAA AGGCTGCGGA GGTTGCCTTC
AGGACTCTAA AAGAACTAAT TGTTAACTTG TAG
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| Protein sequence | MLKLSLVIST SDAAFDALAF KGDLKKGMEL AKRIGYQAVE IAVRDPSVVD WNEVARLSKE
LSLPICAIGT GQAFLADGLS LTHPDEKIRK KSIERVKKHA EVAESFGAFV IIGLVRGKRE
GRPYREVEKL FLESMNSLLS DTKEVRFVIE PLNRYESDFI NTVEEALRVI EKINSDRVGI
LADTFHMNIE EVNISESLKV AGKKLYHFHV ADSNRWAPGC GHFDFESTFK TLKEIGYDGY
ISVECLPLPG GMEKAAEVAF RTLKELIVNL
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