Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpet_0503 |
Symbol | |
ID | 5171360 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga petrophila RKU-1 |
Kingdom | Bacteria |
Replicon accession | NC_009486 |
Strand | - |
Start bp | 498637 |
End bp | 499968 |
Gene Length | 1332 bp |
Protein Length | 443 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640563010 |
Product | extracellular solute-binding protein |
Protein accession | YP_001244101 |
Protein GI | 148269641 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2182] Maltose-binding periplasmic proteins/domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00000478191 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAAAGC TTCTACTTGT GATCATCTTG ACCATAGGTC TTTTGATGTT CGCAGAAGAG ATCACCATCA CCGCGTGGAC CGTGGGACCC GATAATCCAT CTTACTACAG GTTTGACAAT CTGAAAACAG CTGCAGAGAG GCTGAACAAG ATTCTGAAGG ACCTTGGAGT CGATCTCACC GTCAAAGTCG ATGGCTACTT TGATACGACG GATTGGAGTT CTTTCAAGCA GAAGGTTGTC TTTGGAATCA AGTCTGGTCA GGTAGTGGAT ATCATCTGTT CGGGACACGA CGACATAGGA GCCTGGGCGA AAGCGGGTTA CATCATTCCT CTAGACGACT ATGTGAAGAA GTACTGGGAC GAGGAGTACT ATGACTTCAT TCCATCGCTC TGGGAGGCTA CCAAGTACAA AGGAAAGATC TACGGAATCC CACAGGACAC AGAAGCAAGA CCTTTCTACA TCAACAAGCA GGTCTTGAAA AAACTCGGCT GGTCGGATGA AGAAATCAAC TCTCTGCCAG ACAGGATCGC CAGGGGAGAG TTCACCTTTG AAGACTTCAT TGAAGTGGCA AAAGAAGCCG TTGAAAAGGG TCTTGTGGAG TGGGGACTCT ACCACAGACC GAAAGCAGGT ATCGACTACT ACCAGCTCAT GATCAGCATG GGTATCGACT TCTACGATGA GGAAAAGGCT GTGTTCGTTT ACAACGTAAA AGAGATGAAA GACTACTTCA AGCTCCTCTA CGACCTTGCG AACACCTACA AGATTCTTCC AAAGAACATG ATAGGAACAC CGTGGACCTC TGTTCACAAG GATGTCACGA GCGGAAAGGT CCTGGCATGG ATGGGTGGTA CATGGAACTG GGCTGAATGG AAGAAAGATT ACGGAAAGAC AGAGGAAGAA CTGCAGGACA TGTTCATCCT CGCTCCTGTT CCGAAGTTCA AAGGCAGAGG AAGGCCGAAC ACCCTGTCCC ATCCAATCGT TTACATGATC CCGAGCACGA GTAAATACCC AGACATTGCA TTCTTGCTCA TAACCTTGGC TTCTGCACCG GAACTCAACA TGAGACACGC TGTTGAGAGC GGGCACCTGC CGATCAGATG GCAGCAAACG GTGCTTCCTG AGTACACCAA GGAATTTATC ATGGTGGAAG GAACGAAGCT TTTGCCGTAC TCCGGTTTCA TTCCAAACGA TGACATGTTC AACCTCTACA CCCAGATCAT CTTCGAAGGA ATGCAGATGG CCGAAAGCGG TATGGATCCA GAGAAGGTGG CAGAAGACGT TGCAAAAAGG CTGAAGTCCC AGCTGAAAGA TAGGGTTGTG ATCGTGGAGT GA
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Protein sequence | MRKLLLVIIL TIGLLMFAEE ITITAWTVGP DNPSYYRFDN LKTAAERLNK ILKDLGVDLT VKVDGYFDTT DWSSFKQKVV FGIKSGQVVD IICSGHDDIG AWAKAGYIIP LDDYVKKYWD EEYYDFIPSL WEATKYKGKI YGIPQDTEAR PFYINKQVLK KLGWSDEEIN SLPDRIARGE FTFEDFIEVA KEAVEKGLVE WGLYHRPKAG IDYYQLMISM GIDFYDEEKA VFVYNVKEMK DYFKLLYDLA NTYKILPKNM IGTPWTSVHK DVTSGKVLAW MGGTWNWAEW KKDYGKTEEE LQDMFILAPV PKFKGRGRPN TLSHPIVYMI PSTSKYPDIA FLLITLASAP ELNMRHAVES GHLPIRWQQT VLPEYTKEFI MVEGTKLLPY SGFIPNDDMF NLYTQIIFEG MQMAESGMDP EKVAEDVAKR LKSQLKDRVV IVE
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