| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_0503 |
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| Symbol | |
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| ID | 5171360 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | - |
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| Start bp | 498637 |
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| End bp | 499968 |
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| Gene Length | 1332 bp |
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| Protein Length | 443 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640563010 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001244101 |
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| Protein GI | 148269641 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2182] Maltose-binding periplasmic proteins/domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00000478191 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAAAGC TTCTACTTGT GATCATCTTG ACCATAGGTC TTTTGATGTT CGCAGAAGAG
ATCACCATCA CCGCGTGGAC CGTGGGACCC GATAATCCAT CTTACTACAG GTTTGACAAT
CTGAAAACAG CTGCAGAGAG GCTGAACAAG ATTCTGAAGG ACCTTGGAGT CGATCTCACC
GTCAAAGTCG ATGGCTACTT TGATACGACG GATTGGAGTT CTTTCAAGCA GAAGGTTGTC
TTTGGAATCA AGTCTGGTCA GGTAGTGGAT ATCATCTGTT CGGGACACGA CGACATAGGA
GCCTGGGCGA AAGCGGGTTA CATCATTCCT CTAGACGACT ATGTGAAGAA GTACTGGGAC
GAGGAGTACT ATGACTTCAT TCCATCGCTC TGGGAGGCTA CCAAGTACAA AGGAAAGATC
TACGGAATCC CACAGGACAC AGAAGCAAGA CCTTTCTACA TCAACAAGCA GGTCTTGAAA
AAACTCGGCT GGTCGGATGA AGAAATCAAC TCTCTGCCAG ACAGGATCGC CAGGGGAGAG
TTCACCTTTG AAGACTTCAT TGAAGTGGCA AAAGAAGCCG TTGAAAAGGG TCTTGTGGAG
TGGGGACTCT ACCACAGACC GAAAGCAGGT ATCGACTACT ACCAGCTCAT GATCAGCATG
GGTATCGACT TCTACGATGA GGAAAAGGCT GTGTTCGTTT ACAACGTAAA AGAGATGAAA
GACTACTTCA AGCTCCTCTA CGACCTTGCG AACACCTACA AGATTCTTCC AAAGAACATG
ATAGGAACAC CGTGGACCTC TGTTCACAAG GATGTCACGA GCGGAAAGGT CCTGGCATGG
ATGGGTGGTA CATGGAACTG GGCTGAATGG AAGAAAGATT ACGGAAAGAC AGAGGAAGAA
CTGCAGGACA TGTTCATCCT CGCTCCTGTT CCGAAGTTCA AAGGCAGAGG AAGGCCGAAC
ACCCTGTCCC ATCCAATCGT TTACATGATC CCGAGCACGA GTAAATACCC AGACATTGCA
TTCTTGCTCA TAACCTTGGC TTCTGCACCG GAACTCAACA TGAGACACGC TGTTGAGAGC
GGGCACCTGC CGATCAGATG GCAGCAAACG GTGCTTCCTG AGTACACCAA GGAATTTATC
ATGGTGGAAG GAACGAAGCT TTTGCCGTAC TCCGGTTTCA TTCCAAACGA TGACATGTTC
AACCTCTACA CCCAGATCAT CTTCGAAGGA ATGCAGATGG CCGAAAGCGG TATGGATCCA
GAGAAGGTGG CAGAAGACGT TGCAAAAAGG CTGAAGTCCC AGCTGAAAGA TAGGGTTGTG
ATCGTGGAGT GA
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| Protein sequence | MRKLLLVIIL TIGLLMFAEE ITITAWTVGP DNPSYYRFDN LKTAAERLNK ILKDLGVDLT
VKVDGYFDTT DWSSFKQKVV FGIKSGQVVD IICSGHDDIG AWAKAGYIIP LDDYVKKYWD
EEYYDFIPSL WEATKYKGKI YGIPQDTEAR PFYINKQVLK KLGWSDEEIN SLPDRIARGE
FTFEDFIEVA KEAVEKGLVE WGLYHRPKAG IDYYQLMISM GIDFYDEEKA VFVYNVKEMK
DYFKLLYDLA NTYKILPKNM IGTPWTSVHK DVTSGKVLAW MGGTWNWAEW KKDYGKTEEE
LQDMFILAPV PKFKGRGRPN TLSHPIVYMI PSTSKYPDIA FLLITLASAP ELNMRHAVES
GHLPIRWQQT VLPEYTKEFI MVEGTKLLPY SGFIPNDDMF NLYTQIIFEG MQMAESGMDP
EKVAEDVAKR LKSQLKDRVV IVE
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