| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_0501 |
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| Symbol | |
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| ID | 5171009 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | - |
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| Start bp | 496868 |
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| End bp | 497716 |
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| Gene Length | 849 bp |
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| Protein Length | 282 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640563008 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001244099 |
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| Protein GI | 148269639 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0395] ABC-type sugar transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00270449 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACTCT CGTTCTGGCA AAAAAATTCG GAAAAAATCA GAAATTTTGT GATAATCCTC
GTGCTTTTTC TCATAACCTC ACCGATTCTG GTGGGGTACG TCTGGCTCAT TCTGAGATCT
TTCAGCGAGG ATCTGGTGAA CGGCTTTGTC CCCACGAAGC TCACCCTGAA AAACTGGAGA
TTCCTCTGGC AGGAGATCAA GGGATATCCG AACATCTGGC AAACCACGCT GAACACCGCT
CTGCTAGCAC TCGGTGTGAT GGGAATTGAG GTGTTGATCA CAAGCCTTGG TGGGTATGCA
CTCTCAAGGT ACGATTTTCC TGGAAGGTCC TCTATGATGA AGTTCATTCT TGCACTTCAT
GCTTTTCCGG CAATATCTCT CATGACAGCT GTGTTTTACC TCCTCTGGAC GCTTAGACTG
CTGGATACCC TCTGGGGAGT GATACTCCTC AAAGCCTCTC TGGAAGTGCC GTGGGGCACC
TGGATTATGA AGGGGTTTTA CGATGGTATT CCCTGGGAAC TCGAGTGGGC AGGCCTTGTT
GATGGCTACA GCAGATTCGA GGTGTGGAGA AAGATTCTTC TTCCACTTGT AAAACCAGGG
ATCGCCGTTA CGGCCATCTT TGCTTTCCTT TCCGGATGGT CTGAATTCGT TTTCGTGAAC
ACGTTCATCT TCTCGCAGAA CCTGTGGACA CTCTCAAAGT ACGTAAAAGG GTTCATCGGA
GACTACAGAT TCGCAGACTA CGGGCTTGTG ACTGCCGTGG GATTGTTCTA CATGATACCA
ACGATCATCT TTTTCTTCTT CGTCAGCAAG CACATGATAA AACTGACCAT TGGGGGAGTG
AAAGGATAA
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| Protein sequence | MKLSFWQKNS EKIRNFVIIL VLFLITSPIL VGYVWLILRS FSEDLVNGFV PTKLTLKNWR
FLWQEIKGYP NIWQTTLNTA LLALGVMGIE VLITSLGGYA LSRYDFPGRS SMMKFILALH
AFPAISLMTA VFYLLWTLRL LDTLWGVILL KASLEVPWGT WIMKGFYDGI PWELEWAGLV
DGYSRFEVWR KILLPLVKPG IAVTAIFAFL SGWSEFVFVN TFIFSQNLWT LSKYVKGFIG
DYRFADYGLV TAVGLFYMIP TIIFFFFVSK HMIKLTIGGV KG
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