| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_0499 |
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| Symbol | |
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| ID | 5170277 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | - |
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| Start bp | 494856 |
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| End bp | 495770 |
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| Gene Length | 915 bp |
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| Protein Length | 304 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640563006 |
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| Product | xylose isomerase domain-containing protein |
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| Protein accession | YP_001244097 |
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| Protein GI | 148269637 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1082] Sugar phosphate isomerases/epimerases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00421742 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATAAAGG GAATAGGAAC CAACGTGGAT ACAAGGAGGG TAAACGGTTC AATAAAAAGA
CTGGTGAGCG AACTCGAGTT TTTCAAAAGC ATAGGATTCG ATTATGTGGA GATTCCAGCT
GCTGGCCTCG ATGTGATAGC ACGGGGCAGG ATCATTAGGA AAAGGCTTGA GCGAGTGAAA
GAACTTCTTT CCAACTACAA TTTCCGATAC ACGGTTCATG CTCCCGATGT GATAAATCTG
AAGATAAAAA CCAATCCCTG GCACTACCAG GTTATGGAAG CCACAATAGA ATTCGCCGGT
GAGATAAATG CGGAAGTGGT GGTTTACCAT TACGGAGAAG TGGATCATTC GATAGATGTT
CCCGAGAGAG TTCAAAGAAA GACTGAAATC GTGGCTCTCC GTGAATTGGC GGATCTTGCA
AAAGAGAAGG GTGTTGTCAT AGGCGTTGAA AATGTTGGTC ATCCAGTTTC TGAGGTGTTG
AAGCTTGTAA GAGCGGTGAA TCATCCAAAC GTGAAGCTCG TCATAGATGT GGGTCATTTG
TTTATAGTTT CAAACTACAC CGGTATAGAT TTCTACGATG AGTTGAAGAA GGGCCTTCCA
TATGCAGTTG AACTGCATCT CAGCGATAAC TTCGGGGAGT CTCCGCAGAC TTATCAAAAA
ATACCGGATG TAGAAGCCTT TCGTTTCGTC TATGGAATAG GAGATCTTCA CCTTCCCATT
GGAGAAGGAG ATATTCCGTA CAACAAGGTC TTCAGGATAA TCAGAGAGTC TGGTTTCGAT
GGTATCGTAA TTTTAGAAAT AAATTCCATG GACAGATTCG CTGATGAGTA TGCGGACTCC
CTCAACCTTC TGAGAAGGCG TCTGATTCTT GCAGCAGACA ACAACAAGAC TAAAAAAAGA
AGAAAGGTCA AGTGA
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| Protein sequence | MIKGIGTNVD TRRVNGSIKR LVSELEFFKS IGFDYVEIPA AGLDVIARGR IIRKRLERVK
ELLSNYNFRY TVHAPDVINL KIKTNPWHYQ VMEATIEFAG EINAEVVVYH YGEVDHSIDV
PERVQRKTEI VALRELADLA KEKGVVIGVE NVGHPVSEVL KLVRAVNHPN VKLVIDVGHL
FIVSNYTGID FYDELKKGLP YAVELHLSDN FGESPQTYQK IPDVEAFRFV YGIGDLHLPI
GEGDIPYNKV FRIIRESGFD GIVILEINSM DRFADEYADS LNLLRRRLIL AADNNKTKKR
RKVK
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