| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_0486 |
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| Symbol | |
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| ID | 5170552 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | + |
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| Start bp | 480614 |
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| End bp | 481621 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 640562995 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001244086 |
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| Protein GI | 148269626 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 45 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTGGAAGT ACACAATCGC TAGATTCATA CAATTTCTCA TAGTTGTATT TATAAGCGTA
ACGGCTATTT TTTTAATAGT AAGATTAACT CCGAGCGGTC CTGTTGAAAA CGCAATAGCA
AGAATTTCAT CAAGTGGAGC CTACCTAGAA CCAAGTCTTG TAGAAAAAAT GATAGATTCT
TTGAAAGAAA TGTATGGTTT AAAAGGAAAT TTGTTTGAAC AATATATCAA CACCTGGAAA
AGATTGCTCA CTTTAGATTT TGGCCCATCC TTGACTTACT TTCCAACCCC TGTGAAATCT
ATTATCAGAG AATCTGTTTT TTGGACAATA GGATTGTTAG GCACGACAAC CGTTTTATCG
TGGATAATAG GAAATATACT AGGAGTTTTA GCAGGTTATT ATGGTCAGAA TTCACGCTTG
TTGAATTTGA TTGATACACT TTTCATGATT GTTAGACCTA TTCCTTACTA CATTCTCGCT
TTTGTGCTTC TTATAGTATT TGCTTATTAT ATTCCAATTT TTCCCATAGG AGGGGCTTAC
ACACCAGGTA TAATTCCTCA AATGAACTGG GGTTTCTTTC TCGATATATT AAGACATGCA
TTTCTCCCTG CCTTGAGTTT ACTACTCCTT GGAATAGCCG GTTGGTTTCA AAGTATGAAA
ATTATATCAA TTAATATTAA AAGAGAAGAT TTTGTCGTTT ATGCAAAGTA TGGAGGGGTA
CCGGATAAGA AAATAGTTAT GAAATATATA TTTAGAAATG CCCTTTTACC TCAAATAACA
GGCCTATCCC TTTCGTTGGG TCAAATTTTT GGAGGAGCTT TGATAACAGA AATTGTTTTT
TCTTACCCAG GGCTAGGTGG AGTACTCTAT TCAGCCATTC TGCAGTCAGA TTACAATACA
ATTTTAGGAA TTGTTATGTT TTCAGTTCTG GCCATTTCAC TTGGAACATT AATTTTGGAC
ATAACATATC CTCTTTTTGA TCCTCGAATT AGATACTCAA ATAGGTGA
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| Protein sequence | MWKYTIARFI QFLIVVFISV TAIFLIVRLT PSGPVENAIA RISSSGAYLE PSLVEKMIDS
LKEMYGLKGN LFEQYINTWK RLLTLDFGPS LTYFPTPVKS IIRESVFWTI GLLGTTTVLS
WIIGNILGVL AGYYGQNSRL LNLIDTLFMI VRPIPYYILA FVLLIVFAYY IPIFPIGGAY
TPGIIPQMNW GFFLDILRHA FLPALSLLLL GIAGWFQSMK IISINIKRED FVVYAKYGGV
PDKKIVMKYI FRNALLPQIT GLSLSLGQIF GGALITEIVF SYPGLGGVLY SAILQSDYNT
ILGIVMFSVL AISLGTLILD ITYPLFDPRI RYSNR
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