Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpet_0481 |
Symbol | |
ID | 5170332 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga petrophila RKU-1 |
Kingdom | Bacteria |
Replicon accession | NC_009486 |
Strand | - |
Start bp | 473977 |
End bp | 474621 |
Gene Length | 645 bp |
Protein Length | 214 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640562990 |
Product | GntR family transcriptional regulator |
Protein accession | YP_001244081 |
Protein GI | 148269621 |
COG category | [K] Transcription |
COG ID | [COG1802] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAA TCGAAGTGGA CCTCGTGAGA ACGAAGGTCT ACAATCTTCT CAAAGAAATG ATACTGAACC ACGAATTGAA GCTTGGAGAG AAACTAAACG TGAGAGAACT CTCCGAAAAA CTTGGTATCA GCTTTACTCC TGTGCGGGAT GCCCTTCTCC AGCTTGCAAC TGAGGGTCTT GTGAAGGTGG TTCCAAGGGT TGGTTTTTTT GTAACCGACG TCGATGAGAA ATTCATAAGA GAAACCATAG AAACGAGAAT CATGATGGAA GTCTTCTGTC TTGAAAATTA CTTCGATAAA ATTGCTGGTT CCGAAGAACT TTTAGAGATA AAGGGAGAAA TCGATGATGT GGAGAAAAGC GCCAAGAGAG AGATTTTTGA CGATTCCGAT GAAAGGCTAC ACAAACTCTT CATCAGAGCC TCGGGAAATG AACTCATCAT ATCTTTGTAT GAAAAAATAT GGGATCGTAT AGACCTCGTA AGGCATCTGA ACGAAAGATA CGTCGTTTCG AACAGGGAAC ACAAAGAACT CATAGAGAGA ATCATCAGCG GCGATAAAGA AGGCGCTATT GAAAAGTTAA AAGAACACTT GAAAAATGTG GAGGCGGAGA CCATAAAGAA CCTGTACACA TATGAAAGGA GTTGA
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Protein sequence | MKKIEVDLVR TKVYNLLKEM ILNHELKLGE KLNVRELSEK LGISFTPVRD ALLQLATEGL VKVVPRVGFF VTDVDEKFIR ETIETRIMME VFCLENYFDK IAGSEELLEI KGEIDDVEKS AKREIFDDSD ERLHKLFIRA SGNELIISLY EKIWDRIDLV RHLNERYVVS NREHKELIER IISGDKEGAI EKLKEHLKNV EAETIKNLYT YERS
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