Gene Tpet_0466 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpet_0466 
SymbolrplK 
ID5170606 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga petrophila RKU-1 
KingdomBacteria 
Replicon accessionNC_009486 
Strand
Start bp459114 
End bp459539 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content47% 
IMG OID640562970 
Product50S ribosomal protein L11 
Protein accessionYP_001244066 
Protein GI148269606 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0080] Ribosomal protein L11 
TIGRFAM ID[TIGR01632] 50S ribosomal protein L11 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00268184 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGAAGA AAGTAACGGC TCAGATTAAA TTGCAGTTGC CCGCCGGGAA AGCCACACCG 
GCGCCACCTG TTGGACCTGC TTTGGGTCAG CACGGCGTAA ACATCATGGA ATTTTGTAAA
AGGTTCAATG CCGAAACAGC GGATAAAGCA GGCATGATTC TTCCTGTTGT TATAACGGTG
TACGAAGATA AGTCGTTCAC CTTTATCATC AAAACACCTC CGGCTTCCTT CCTTCTCATG
AAAGCGGCAG GTTTGGAGAA AGGTTCTTCC GAACCAAAGA GAAAGATTGT TGGAAAGGTT
ACCAGAAAAC AGATCGAAGA GATAGCGAGA ACAAAGATGC CGGACTTGAA CGCAAACAGT
TTGGAAGCGG CCATGAAGAT CATTGAAGGA ACCGCTAAGA GCATGGGAAT AGAAGTGGTG
GACTGA
 
Protein sequence
MAKKVTAQIK LQLPAGKATP APPVGPALGQ HGVNIMEFCK RFNAETADKA GMILPVVITV 
YEDKSFTFII KTPPASFLLM KAAGLEKGSS EPKRKIVGKV TRKQIEEIAR TKMPDLNANS
LEAAMKIIEG TAKSMGIEVV D