Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpet_0464 |
Symbol | |
ID | 5170687 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga petrophila RKU-1 |
Kingdom | Bacteria |
Replicon accession | NC_009486 |
Strand | - |
Start bp | 457708 |
End bp | 458247 |
Gene Length | 540 bp |
Protein Length | 179 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640562968 |
Product | 50S ribosomal protein L10 |
Protein accession | YP_001244064 |
Protein GI | 148269604 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0244] Ribosomal protein L10 |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0359791 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGCTGACCA GGCAACAAAA AGAACTCATA GTTGAAGAAA TGAGTGAAAT ATTCAAAAAA ACATCGCTGA TACTCTTTGC CGATTTCCTG GGTTTCACGG TGGCTGATCT CACCGAACTT CGCTCCAAAT TGAGAGAAAA GTACGGAGAT GGAGCAAGGT TCAGGGTTGT GAAAAATACT CTCTTGAATC TTGCGCTCAA GAACGCTGAA TACGAAGGCT ACGAAGAATT TCTCAAAGGA CCTACAGCTG TACTCTACGT CACGGAAGGA GATCCTGTGG AGGCTGTCAA GATAGTTTAC AACTTTTACA AAGATAAAAA GGCTGATCTT TCGAGGCTCA AGGGTGGTTT CCTCGAAGGA AAGAAATTCA CGGCAGAAGA AGTGGAAAAC ATCGCAAAAC TCCCATCCAA AGAAGAGCTC TACGCTATGC TCGTTGGTCG TGTGAAAGCT CCTATTACCG GTCTTGTGTT TGTTCTGAGT GGTATTTTGA GGAATCTCGT GTATGTGCTC AATGCCATTA AAGAGAAAAA ATCCGAATGA
|
Protein sequence | MLTRQQKELI VEEMSEIFKK TSLILFADFL GFTVADLTEL RSKLREKYGD GARFRVVKNT LLNLALKNAE YEGYEEFLKG PTAVLYVTEG DPVEAVKIVY NFYKDKKADL SRLKGGFLEG KKFTAEEVEN IAKLPSKEEL YAMLVGRVKA PITGLVFVLS GILRNLVYVL NAIKEKKSE
|
| |