Gene Tpet_0460 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpet_0460 
Symbol 
ID5170485 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga petrophila RKU-1 
KingdomBacteria 
Replicon accessionNC_009486 
Strand
Start bp446337 
End bp448184 
Gene Length1848 bp 
Protein Length615 aa 
Translation table11 
GC content50% 
IMG OID640562964 
Product4-phytase 
Protein accessionYP_001244060 
Protein GI148269600 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0747] ABC-type dipeptide transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAAAC TGTTTGTGCT GTTTCTGGCA ATCCTGTCAG TTCTGGTACT GGCCGAAGTG 
AAAAACCCTG ACACCATAAT CGATGCCACC ATTGGAGAAC CCGACACTCT CGACCCACAC
TACGCCTATG ACACGGCGAG TGGCGAAGTT ATCTACAACG TGTACGAGAA CCTGATCGCT
TACAAAGGAG AAAGCCTCAC AGAATTCGAA CCACGCCTTG CGGAAAGATG GGAAATTCTG
GACGACGGGA AAACTTACAA GTTCTACATC AGGAAAGGTG TGAAGTTCCA CGAAGGAGGA
GATCTCACAC CAGAAGACGT GGAATACAGC TTTGAGAGAG GTCTCATCTT CGACCCAACA
GCGGGTCCCA TGTGGATGCT CTGGGAAGCC CTGTTCGGTG TGGATTCACT GGAAACTTTC
GTCGAGGAAA AGATCGGCAA GCCTTACAGC GAACTCTTCG ACGAAAACGG TGAGCCGCTT
CCAGAGTACA GAGACGCCCT CATAAAGATC TACACGGATT ACATCGATCC CGCCATCGAA
GTTGAAGGTG ACGCCGTTGT GTTCCACCTC GTGAGACCCT TCGCACCGTT CATGTACATA
CTCGCCCAGA GCGCCAGCTG GAGTGCTGTC CTCGACAAAG AGTGGTGTAT AGAGATAGGA
TGCTGGGACG GAAGAGCCGA TACCTGGTGG AAGTACCACG ATATCAGAAA AGAAGATTCT
CCTCTCTACG CGAGAATGAA CGGAACTGGA CCCTTCAAAT TCGTCGAATG GGACAGAGCT
CAGCAGAAAG TCATCCTCGA GCGAAACGAC AACTACTGGA GAGAACCCGC GAAGATCAAA
AGAGTTATCA TCTGGGGAAT CGACGAGTGG AGCACAAGAA GGGCGATGTT CCTTCAGGGA
GACGCCGATA TCTGTGCTGT CCCAACCCAG TACCTCGAGC AGGTGGAAGG AAAACCCGGT
GTCACCGTTA TAAAGGGACT TCCTGAACTT GCGGTAACAT CCCTTCACTT CGCGTGGAAC
GTTCCCGAAG ACAGCAAGTA CATAGGCTCT GGAAAACTCG ACGGAAACGG AATACCACCA
GACTTCTTCA CTGATGAAAA CGTGAGAAAA GCCTTCATCT ACGCGTTCGA CTACGACACA
TTCATAAACG AAGTGCTCAA AGGTCTTGGT AGAAAGATAC CAACAGACCT TCCAGAAGGA
CTCCTCGGAT TCAACGAAGA GCTGCTGAAC GATCCAGACG CTCCACACTT CGATATTGTG
AAAGCAACAG AGTACTTCAA GAAGGCATGG AACGGAGAAG TCTGGGAGAA AGGATTCAAG
ATCACACTGC TTTACAACAC CGGTAACGAT GTGAGAAGAC AGGCCGCGGA GATGCTGAAG
GCATACATCG AGATGATCAA TCCGACGAAG TTCAAGGTCG AAGTGAGAGG CGTTCAGTGG
CCTACGTATC TCGACGCAAC CAAGAGAGGA GAAGTGCCTG TCTTCATCAT AGGATGGCTC
GCAGATTATC CGGATCCTCA CAACTTCATC TTCACATACT ACCACAGTGC AGGAGTTTAC
TCTGGAAGAC AGGGTGAGAA CTTCAGGAAG TTCATTTCCA CACCACATCC CGACCTTGGT
GGTAGAAGCC TCGACGAGCT CATAGAAGAA GCGATCGCGA AGACCGATCC CGCAGAAAGA
CAGGCACTCT ACGAAGAGAT CCAGAGGTTC GCAATGAAGC ACGCCCTTGG TATGCCTCTC
TACCAGCCGC TCGGTGTGAG AGTCCAGAGA AGCTGGGTCA AAGGATGGTA CTACAATCCA
ATGAGACCTG GTGACGACTA CTACGTGCTC TGGAAAGCAG AAGAGTAA
 
Protein sequence
MKKLFVLFLA ILSVLVLAEV KNPDTIIDAT IGEPDTLDPH YAYDTASGEV IYNVYENLIA 
YKGESLTEFE PRLAERWEIL DDGKTYKFYI RKGVKFHEGG DLTPEDVEYS FERGLIFDPT
AGPMWMLWEA LFGVDSLETF VEEKIGKPYS ELFDENGEPL PEYRDALIKI YTDYIDPAIE
VEGDAVVFHL VRPFAPFMYI LAQSASWSAV LDKEWCIEIG CWDGRADTWW KYHDIRKEDS
PLYARMNGTG PFKFVEWDRA QQKVILERND NYWREPAKIK RVIIWGIDEW STRRAMFLQG
DADICAVPTQ YLEQVEGKPG VTVIKGLPEL AVTSLHFAWN VPEDSKYIGS GKLDGNGIPP
DFFTDENVRK AFIYAFDYDT FINEVLKGLG RKIPTDLPEG LLGFNEELLN DPDAPHFDIV
KATEYFKKAW NGEVWEKGFK ITLLYNTGND VRRQAAEMLK AYIEMINPTK FKVEVRGVQW
PTYLDATKRG EVPVFIIGWL ADYPDPHNFI FTYYHSAGVY SGRQGENFRK FISTPHPDLG
GRSLDELIEE AIAKTDPAER QALYEEIQRF AMKHALGMPL YQPLGVRVQR SWVKGWYYNP
MRPGDDYYVL WKAEE