Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpet_0460 |
Symbol | |
ID | 5170485 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga petrophila RKU-1 |
Kingdom | Bacteria |
Replicon accession | NC_009486 |
Strand | + |
Start bp | 446337 |
End bp | 448184 |
Gene Length | 1848 bp |
Protein Length | 615 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640562964 |
Product | 4-phytase |
Protein accession | YP_001244060 |
Protein GI | 148269600 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAGAAAC TGTTTGTGCT GTTTCTGGCA ATCCTGTCAG TTCTGGTACT GGCCGAAGTG AAAAACCCTG ACACCATAAT CGATGCCACC ATTGGAGAAC CCGACACTCT CGACCCACAC TACGCCTATG ACACGGCGAG TGGCGAAGTT ATCTACAACG TGTACGAGAA CCTGATCGCT TACAAAGGAG AAAGCCTCAC AGAATTCGAA CCACGCCTTG CGGAAAGATG GGAAATTCTG GACGACGGGA AAACTTACAA GTTCTACATC AGGAAAGGTG TGAAGTTCCA CGAAGGAGGA GATCTCACAC CAGAAGACGT GGAATACAGC TTTGAGAGAG GTCTCATCTT CGACCCAACA GCGGGTCCCA TGTGGATGCT CTGGGAAGCC CTGTTCGGTG TGGATTCACT GGAAACTTTC GTCGAGGAAA AGATCGGCAA GCCTTACAGC GAACTCTTCG ACGAAAACGG TGAGCCGCTT CCAGAGTACA GAGACGCCCT CATAAAGATC TACACGGATT ACATCGATCC CGCCATCGAA GTTGAAGGTG ACGCCGTTGT GTTCCACCTC GTGAGACCCT TCGCACCGTT CATGTACATA CTCGCCCAGA GCGCCAGCTG GAGTGCTGTC CTCGACAAAG AGTGGTGTAT AGAGATAGGA TGCTGGGACG GAAGAGCCGA TACCTGGTGG AAGTACCACG ATATCAGAAA AGAAGATTCT CCTCTCTACG CGAGAATGAA CGGAACTGGA CCCTTCAAAT TCGTCGAATG GGACAGAGCT CAGCAGAAAG TCATCCTCGA GCGAAACGAC AACTACTGGA GAGAACCCGC GAAGATCAAA AGAGTTATCA TCTGGGGAAT CGACGAGTGG AGCACAAGAA GGGCGATGTT CCTTCAGGGA GACGCCGATA TCTGTGCTGT CCCAACCCAG TACCTCGAGC AGGTGGAAGG AAAACCCGGT GTCACCGTTA TAAAGGGACT TCCTGAACTT GCGGTAACAT CCCTTCACTT CGCGTGGAAC GTTCCCGAAG ACAGCAAGTA CATAGGCTCT GGAAAACTCG ACGGAAACGG AATACCACCA GACTTCTTCA CTGATGAAAA CGTGAGAAAA GCCTTCATCT ACGCGTTCGA CTACGACACA TTCATAAACG AAGTGCTCAA AGGTCTTGGT AGAAAGATAC CAACAGACCT TCCAGAAGGA CTCCTCGGAT TCAACGAAGA GCTGCTGAAC GATCCAGACG CTCCACACTT CGATATTGTG AAAGCAACAG AGTACTTCAA GAAGGCATGG AACGGAGAAG TCTGGGAGAA AGGATTCAAG ATCACACTGC TTTACAACAC CGGTAACGAT GTGAGAAGAC AGGCCGCGGA GATGCTGAAG GCATACATCG AGATGATCAA TCCGACGAAG TTCAAGGTCG AAGTGAGAGG CGTTCAGTGG CCTACGTATC TCGACGCAAC CAAGAGAGGA GAAGTGCCTG TCTTCATCAT AGGATGGCTC GCAGATTATC CGGATCCTCA CAACTTCATC TTCACATACT ACCACAGTGC AGGAGTTTAC TCTGGAAGAC AGGGTGAGAA CTTCAGGAAG TTCATTTCCA CACCACATCC CGACCTTGGT GGTAGAAGCC TCGACGAGCT CATAGAAGAA GCGATCGCGA AGACCGATCC CGCAGAAAGA CAGGCACTCT ACGAAGAGAT CCAGAGGTTC GCAATGAAGC ACGCCCTTGG TATGCCTCTC TACCAGCCGC TCGGTGTGAG AGTCCAGAGA AGCTGGGTCA AAGGATGGTA CTACAATCCA ATGAGACCTG GTGACGACTA CTACGTGCTC TGGAAAGCAG AAGAGTAA
|
Protein sequence | MKKLFVLFLA ILSVLVLAEV KNPDTIIDAT IGEPDTLDPH YAYDTASGEV IYNVYENLIA YKGESLTEFE PRLAERWEIL DDGKTYKFYI RKGVKFHEGG DLTPEDVEYS FERGLIFDPT AGPMWMLWEA LFGVDSLETF VEEKIGKPYS ELFDENGEPL PEYRDALIKI YTDYIDPAIE VEGDAVVFHL VRPFAPFMYI LAQSASWSAV LDKEWCIEIG CWDGRADTWW KYHDIRKEDS PLYARMNGTG PFKFVEWDRA QQKVILERND NYWREPAKIK RVIIWGIDEW STRRAMFLQG DADICAVPTQ YLEQVEGKPG VTVIKGLPEL AVTSLHFAWN VPEDSKYIGS GKLDGNGIPP DFFTDENVRK AFIYAFDYDT FINEVLKGLG RKIPTDLPEG LLGFNEELLN DPDAPHFDIV KATEYFKKAW NGEVWEKGFK ITLLYNTGND VRRQAAEMLK AYIEMINPTK FKVEVRGVQW PTYLDATKRG EVPVFIIGWL ADYPDPHNFI FTYYHSAGVY SGRQGENFRK FISTPHPDLG GRSLDELIEE AIAKTDPAER QALYEEIQRF AMKHALGMPL YQPLGVRVQR SWVKGWYYNP MRPGDDYYVL WKAEE
|
| |