Gene Tpet_0457 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpet_0457 
Symbol 
ID5171788 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga petrophila RKU-1 
KingdomBacteria 
Replicon accessionNC_009486 
Strand+ 
Start bp442398 
End bp442958 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content44% 
IMG OID640562961 
Productlipoprotein signal peptidase 
Protein accessionYP_001244057 
Protein GI148269597 
COG category[M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0597] Lipoprotein signal peptidase 
TIGRFAM ID[TIGR00077] lipoprotein signal peptidase 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCATTTG TGATGGTTCT CACGATTGTT CTGGATCAGC TTACAAAGCG GATAGCAAGC 
GAGATACACG GAACCTTCTT CATAGTTCCG GGTTTTTTGA GATTCGTGAA GGCAACCAAC 
CGAGGAATCG CACTCGGGTT GTTTAAAAAT CTTTCCGAAC AGCTTCTCTG GACCGTGATG 
TTCGTTGTTG TTTTTCTATC CCTACTTCCT TATATTTTCA AGTTCAGCAG GCTGGAAAGA 
ACAGCCATGG GCTTCATTCT TGGGGGAGCT CTCGGTAACC TTCTCGACAG AATCAGATTC 
GGATACGTTC TTGATTTCCT GAATCTGACT TTTCTCCCAA CGATATTCAA TCTTGCAGAC 
GTGTTCATCA TAGTCGGAGG AGCACTTATG ATACTGGGAG TTTTCAGAGG TGGAGACAAT 
GAAAGTTTGG AGAGTCGAAA AAAGAGAAGA GGGTTGGAGA CTGGATCAGT TTTTGAAGGA 
GAAGACACCG TCATGGATCT CGAGATCACT GATTCAAAAA GCGATAAAAG AGGGCAAAGT 
GAAGGTCAAC GGTCAGATTA A
 
Protein sequence
MAFVMVLTIV LDQLTKRIAS EIHGTFFIVP GFLRFVKATN RGIALGLFKN LSEQLLWTVM 
FVVVFLSLLP YIFKFSRLER TAMGFILGGA LGNLLDRIRF GYVLDFLNLT FLPTIFNLAD 
VFIIVGGALM ILGVFRGGDN ESLESRKKRR GLETGSVFEG EDTVMDLEIT DSKSDKRGQS 
EGQRSD