| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_0453 |
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| Symbol | |
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| ID | 5171165 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | + |
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| Start bp | 438784 |
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| End bp | 440121 |
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| Gene Length | 1338 bp |
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| Protein Length | 445 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640562957 |
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| Product | stage II sporulation E family protein |
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| Protein accession | YP_001244053 |
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| Protein GI | 148269593 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2208] Serine phosphatase RsbU, regulator of sigma subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.315946 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATGAAA GGGAAATTTG CGAAAGAATC GCTGAAATCT TGAATCTTGA ACACGACTGT
TCGAAAGGAA TAGATGATCT TTTGGAGATC CTGGAGTACG AAATAAACGA ATATCGAAAA
AGCTTAGAAG AACAGGCCAT GTTCATGGAA GCTCAAATCG AAGAGCTTTC GCGCTCGTAC
GAAGAAATAT CAACTCTGCT CGAAATCTCG GAGATTTTCG GTACGTTCGA GTTCCCTTTG
AACTTGCAGA ACAAACTGGA AAAAGTCATT CGACTCCTCA GGAACGTGAT AAAATTTGAG
GGTTATGTTG TTCATCTGGA AGGTGAGTTG ACAGCCGGGG ATCTAAACAG AGAAGAAATA
GAAGCAGAAA TAGGAAATCC AGAGAAGACC GTTCTGATAG AGCCCGGAAA ATCTGAGAAG
TTTTCAAATC TTCTGTTTGT ACCGATAAAA GGAAACAGAT ACTACGGATA CATGTGCTTC
ACTGGAAAAG AAGACGGAGG AGTTTTCACC GCAGGTGACA GGAAAATAGC TGAGATGACG
GCAAGATACA TAGCGAGTGC TCTCGACAGA CTGGATTTTC TCAAAAAGGA GATAGAGCGA
GAAAGACTGG AAGAACAATT GAACATAGCA AGACAGATAC AGGCCAATCT TCTTCCCCGG
AAAACTCCAG AGATTGGTTT CATAGAAGCG GATGTCTTCT CTCAACCCGC CGTTCAGGTT
GGTGGAGACT ATTACGATTT CTTTGTGTCA CAGGAGAAAA GGTTTCTCAC AGTCGTGGGT
GATGTGGCAG GAAAGAGTGT ACCGGCGGCT CTGCTAATGA GCGCAGTGAG GAGTTATCTG
AAAGTGCTGG TCACCACGTG TCCCGATCTG GAAAGACTCG TGAACAGGTT GAACTCCATT
CTCTGCGAAG ACATGACAAA CGACCGCTTT GTAACGATGG CTTTTATAGA GATATCTCCA
GATGGAACTT TGAATCTTAT AAACGCAGGC CACAATCCAG TTTATTTCCT GCATAAGGGA
GAGCTCGTCA AGATTGAAAC TTCTGCGATC CCAATCGGTA TAACAGAGTG GGAATACAGA
AAGCACACCA TTCATTTGAA ACCAGATACG TTCGTGATAT CTTACTCCGA CGGATTGACA
GAAGCGAGGA ACGAAGCCGG TGAAGAATTC GGATACGAAA AGCTGGAAAA TATATTGAGG
GAATTCAAGG GTGAAACACC CGCTGAATTG CTGGAGACGC TGAGAAAAAA CGTTAAGTCG
TTTATAGGAG ATGCCCAGCA GCACGATGAT ATGACAATCG TGGTGTTAAA ATATAAAGGA
CAGCAGGAGG TGGAATGA
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| Protein sequence | MNEREICERI AEILNLEHDC SKGIDDLLEI LEYEINEYRK SLEEQAMFME AQIEELSRSY
EEISTLLEIS EIFGTFEFPL NLQNKLEKVI RLLRNVIKFE GYVVHLEGEL TAGDLNREEI
EAEIGNPEKT VLIEPGKSEK FSNLLFVPIK GNRYYGYMCF TGKEDGGVFT AGDRKIAEMT
ARYIASALDR LDFLKKEIER ERLEEQLNIA RQIQANLLPR KTPEIGFIEA DVFSQPAVQV
GGDYYDFFVS QEKRFLTVVG DVAGKSVPAA LLMSAVRSYL KVLVTTCPDL ERLVNRLNSI
LCEDMTNDRF VTMAFIEISP DGTLNLINAG HNPVYFLHKG ELVKIETSAI PIGITEWEYR
KHTIHLKPDT FVISYSDGLT EARNEAGEEF GYEKLENILR EFKGETPAEL LETLRKNVKS
FIGDAQQHDD MTIVVLKYKG QQEVE
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