Gene Tpet_0453 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpet_0453 
Symbol 
ID5171165 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga petrophila RKU-1 
KingdomBacteria 
Replicon accessionNC_009486 
Strand
Start bp438784 
End bp440121 
Gene Length1338 bp 
Protein Length445 aa 
Translation table11 
GC content44% 
IMG OID640562957 
Productstage II sporulation E family protein 
Protein accessionYP_001244053 
Protein GI148269593 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2208] Serine phosphatase RsbU, regulator of sigma subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.315946 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGAAA GGGAAATTTG CGAAAGAATC GCTGAAATCT TGAATCTTGA ACACGACTGT 
TCGAAAGGAA TAGATGATCT TTTGGAGATC CTGGAGTACG AAATAAACGA ATATCGAAAA
AGCTTAGAAG AACAGGCCAT GTTCATGGAA GCTCAAATCG AAGAGCTTTC GCGCTCGTAC
GAAGAAATAT CAACTCTGCT CGAAATCTCG GAGATTTTCG GTACGTTCGA GTTCCCTTTG
AACTTGCAGA ACAAACTGGA AAAAGTCATT CGACTCCTCA GGAACGTGAT AAAATTTGAG
GGTTATGTTG TTCATCTGGA AGGTGAGTTG ACAGCCGGGG ATCTAAACAG AGAAGAAATA
GAAGCAGAAA TAGGAAATCC AGAGAAGACC GTTCTGATAG AGCCCGGAAA ATCTGAGAAG
TTTTCAAATC TTCTGTTTGT ACCGATAAAA GGAAACAGAT ACTACGGATA CATGTGCTTC
ACTGGAAAAG AAGACGGAGG AGTTTTCACC GCAGGTGACA GGAAAATAGC TGAGATGACG
GCAAGATACA TAGCGAGTGC TCTCGACAGA CTGGATTTTC TCAAAAAGGA GATAGAGCGA
GAAAGACTGG AAGAACAATT GAACATAGCA AGACAGATAC AGGCCAATCT TCTTCCCCGG
AAAACTCCAG AGATTGGTTT CATAGAAGCG GATGTCTTCT CTCAACCCGC CGTTCAGGTT
GGTGGAGACT ATTACGATTT CTTTGTGTCA CAGGAGAAAA GGTTTCTCAC AGTCGTGGGT
GATGTGGCAG GAAAGAGTGT ACCGGCGGCT CTGCTAATGA GCGCAGTGAG GAGTTATCTG
AAAGTGCTGG TCACCACGTG TCCCGATCTG GAAAGACTCG TGAACAGGTT GAACTCCATT
CTCTGCGAAG ACATGACAAA CGACCGCTTT GTAACGATGG CTTTTATAGA GATATCTCCA
GATGGAACTT TGAATCTTAT AAACGCAGGC CACAATCCAG TTTATTTCCT GCATAAGGGA
GAGCTCGTCA AGATTGAAAC TTCTGCGATC CCAATCGGTA TAACAGAGTG GGAATACAGA
AAGCACACCA TTCATTTGAA ACCAGATACG TTCGTGATAT CTTACTCCGA CGGATTGACA
GAAGCGAGGA ACGAAGCCGG TGAAGAATTC GGATACGAAA AGCTGGAAAA TATATTGAGG
GAATTCAAGG GTGAAACACC CGCTGAATTG CTGGAGACGC TGAGAAAAAA CGTTAAGTCG
TTTATAGGAG ATGCCCAGCA GCACGATGAT ATGACAATCG TGGTGTTAAA ATATAAAGGA
CAGCAGGAGG TGGAATGA
 
Protein sequence
MNEREICERI AEILNLEHDC SKGIDDLLEI LEYEINEYRK SLEEQAMFME AQIEELSRSY 
EEISTLLEIS EIFGTFEFPL NLQNKLEKVI RLLRNVIKFE GYVVHLEGEL TAGDLNREEI
EAEIGNPEKT VLIEPGKSEK FSNLLFVPIK GNRYYGYMCF TGKEDGGVFT AGDRKIAEMT
ARYIASALDR LDFLKKEIER ERLEEQLNIA RQIQANLLPR KTPEIGFIEA DVFSQPAVQV
GGDYYDFFVS QEKRFLTVVG DVAGKSVPAA LLMSAVRSYL KVLVTTCPDL ERLVNRLNSI
LCEDMTNDRF VTMAFIEISP DGTLNLINAG HNPVYFLHKG ELVKIETSAI PIGITEWEYR
KHTIHLKPDT FVISYSDGLT EARNEAGEEF GYEKLENILR EFKGETPAEL LETLRKNVKS
FIGDAQQHDD MTIVVLKYKG QQEVE