Gene Tpet_0442 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpet_0442 
Symbol 
ID5170654 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga petrophila RKU-1 
KingdomBacteria 
Replicon accessionNC_009486 
Strand
Start bp428917 
End bp430122 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content48% 
IMG OID640562945 
Producttyrosyl-tRNA synthetase 
Protein accessionYP_001244042 
Protein GI148269582 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0162] Tyrosyl-tRNA synthetase 
TIGRFAM ID[TIGR00234] tyrosyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000185644 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACACCGG AGGAACAGGT AAAAATTCTC AAAAGAAACG TTGTTGACTT CGTAAGCGAA 
GAAGAACTCC TCGACAGAAT AAAGAGAAAA GGGAAACTCC GCGTGAAACT CGGCGTGGAT
CCCTCAAGGC CCGATTTGCA TCTGGGCCAC GCGGTCGTTC TGAGGAAGTT GAGAGAGTTT
CAAGATCTCG GTCACACAGT AGTTCTGATC ATAGGAGACT TCACTGCCCG CATTGGTGAT
CCCTCCGGAA GAAACGAAAC ACGTCCCATG CTGACCAGAG AAGAGGTTCT GGAGAACGCA
AAGACCTATC AGGAACAGGC CTTCAAGATA CTGGATCCCG AAAGGACGGA ACTTCGTTTC
AACGGTGAGT GGCTCGACAG AATGACCTTC GCGGACGTGA TCGTTCTGGC TTCAAAGTAC
ACGGTTGCAA GGATGCTCGA AAGAGACGAT TTCGCGAAAA GATTCAAAGA AGGCATCCCC
ATAACCATAT CGGAGTTCCT GTATCCTCTC GCACAGGCCT ACGATTCCGT TGCCATTCAG
GCAGATGTGG AACTCGGCGG AACGGATCAG CTTTTCAACC TCCTTGTGGG AAGGAAGATA
CAGGAAGAAT ACGGTCAGGA GCCCCAGATC GTCATGACGA TGCCGATCAT CGAAGGAACG
GATGGAAAAT TGAAAATGAG CAAAAGCTAC GGAAACTACA TCGCTTTCAA CGATCCACCC
GAGGAGATGT ACGGGAAACT CATGTCCATA CCGGATGAAC TCATTATAAA GTACATGCGT
CTTCTCACGG ACGTTCCAGA AGAACGGATC GAAGAGTACG AAAGAAAGAT GAAAGAAAAA
ACGATCAATC CACGAGACGT GAAGATGGTT CTCGCGTACG AAATAACACG CTTCTTCCAC
GGTGAAGAAA ACGCAAAAAA GGCCCAGGAA CAATTCGTGA AGGTCTTTCA AAAGAAAGAA
ATTCCTGACG AGATGCCGAT CGTTGAGATT TCTCAGGAGA AGAACATCGT GGATCTCCTC
GTGGAGATAG GAGCTGTATC CAGCAAAAGT GAGGCTAAAA GACTCGTTGC TCAGGGTGGA
GTGTACATCG ACGGGGAGAG AATAGAAGAC ATAAAATTCA CCGTGAAACC CGTTGGAGAG
CAAGTTTTGA AAGTTGGAAA GAGGAAGTTC TACAGGATAT CGGGTGGAGA GACAAAAAAA
CTTTAG
 
Protein sequence
MTPEEQVKIL KRNVVDFVSE EELLDRIKRK GKLRVKLGVD PSRPDLHLGH AVVLRKLREF 
QDLGHTVVLI IGDFTARIGD PSGRNETRPM LTREEVLENA KTYQEQAFKI LDPERTELRF
NGEWLDRMTF ADVIVLASKY TVARMLERDD FAKRFKEGIP ITISEFLYPL AQAYDSVAIQ
ADVELGGTDQ LFNLLVGRKI QEEYGQEPQI VMTMPIIEGT DGKLKMSKSY GNYIAFNDPP
EEMYGKLMSI PDELIIKYMR LLTDVPEERI EEYERKMKEK TINPRDVKMV LAYEITRFFH
GEENAKKAQE QFVKVFQKKE IPDEMPIVEI SQEKNIVDLL VEIGAVSSKS EAKRLVAQGG
VYIDGERIED IKFTVKPVGE QVLKVGKRKF YRISGGETKK L