| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_0440 |
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| Symbol | uvrA |
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| ID | 5170937 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | + |
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| Start bp | 425912 |
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| End bp | 428662 |
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| Gene Length | 2751 bp |
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| Protein Length | 916 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640562943 |
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| Product | excinuclease ABC subunit A |
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| Protein accession | YP_001244040 |
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| Protein GI | 148269580 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0178] Excinuclease ATPase subunit |
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| TIGRFAM ID | [TIGR00630] excinuclease ABC, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.674144 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAACGAAA TCGTAGTGAA GGGAGCAAGG GTTCACAATC TGAAGAACAT AACCGTGAAG
ATCCCAAAGA ATAAACTCGT TGTCATAACA GGAGTTTCAG GATCGGGGAA ATCTTCGCTC
GCCATGGACA CGATATACGC CGAAGGGCAG AGAAGATATC TGGAGTCACT TTCCACGTAT
GCGAGGCAAT TCCTCGGTAA CCTGAAAAAA CCCGATGTTG ACGAGATAGA GGGACTTTCC
CCCGCCATCG CCATAGATCA GAAGACCGTC TCTCACAATC CCAGATCGAC CGTTGGAACA
GTGACGGAAA TTTACGATTA CCTGAGGGTG CTCTACGCGA GGATAGGAAA AGCCCACTGC
CCTGAGTGTG GAAGACCTCT CGAAAAAAAG AGCATCGATG AGATCCTCCA GGATCTGTTC
CATTCTTTCA AAGAGGGAAG TCGAATCTAT ATACTCGCAC CGGTTGCAAC GGAGAAGAAA
GGAACGTTCA AAAAAGAGAT CGAAGAGTTC ATCTCCAAAG GATTCGCGAG AATAGAAATA
GACGGCGAGA TTTACAGGCT CGAGGAAGTG CCGGAACTCG ACAAGAACAA ACGGCACACC
GTGAAACTGG TAGTCGATAG ATTGATCCTT GAAACCAGAA ACGAACACAG AATACTGGAC
AGTCTCGAAG TAGCGATGAG AGAGGGGAAA GGATTCGTTG AGATCAGAAA CGTCGACACT
GGAGAGAGCA AGATCTTCAG CGAAAACCTC ATGTGCCCGG TGTGTGGTAT CGGATTTCCA
GAGATCACAC CAAAGCTGTT TTCTTTCAAC AGCCCGTACG GTGCGTGTCC GAACTGTCAC
GGCCTCGGCT TCACATTCGA AGTGGATCCA TCCCTCGTGA TAGACGAGGA AAAAAGTGTT
CCCGAGGGTG CGATCATTCC GTACAGATGG GACAGAAGGC TCTCAAGATG GGTCGCAAGG
GAGATAGAAA GGCAAGGTGT TTCCCCTCAT CTTCCATTCA AGGATCTTCC TGAAGATGTG
AAAGAGTTCG TCTTGTACGG AGATGACCGT TTCGAAGGAG TGGTTCCAAA AGTTCAAAGG
TGGCACAGAG AAACGGAATC TCCTGAGATG AAAGAGTGGT TGGAAAAGAA CTTCATCGTA
CAGAGAACCT GTTCCGTCTG CGGTGGGAAA AGGTTGAACA GGGAAGCCCT CTCTGTGAAG
ATAAACGGTC TGAACATACA CGAGTTCACC GAGCTTTCTA TCTCAGAAGA ACTCGAATTT
TTGAAGAATC TGAATCTCAC CGAAAGAGAA CGAGAAATCG TGGGGGAACT CTTGAAGGAA
ATAGAAAAAA GGCTCGAATT CCTTGTGGAC GTGGGTCTTG AGTATCTGTC CCTTTCCAGA
TCCGCCACCA CGCTCTCCGG AGGAGAATCT CAGAGAATAA GGCTCGCGAC ACAGATAGGT
TCGGGTCTCA CAGGAGTCAT CTACGTCCTG GACGAACCGA CTGTTGGACT CCACCCGAGG
GACACAGAAC GCCTGATAAA GACCCTCAAA AAGCTCAGGG ATCTTGGAAA CACTGTGATA
GTGGTGGAAC ACGACGAGGA AGTGATCAGA AGTGCTGACT ACATCATAGA CATCGGACCG
GGTGGGGGAA CGAACGGCGG TCGGGTCGTC TTCCAGGGTA CCGTGGATGA ACTCCTGAAG
AATCCAGACA GCTCTCTGAC GGGTGAATAC CTCTCGGGCA AAAGAAAGAT CTCTGTAAAC
AAAGCGAGGC GGCTGCCTTA CGCATCTTTG AAGATCAAAG GTGTTCGTCA CAACAACTTG
AAGAACATAG ACGTTGAGAT TCCCCTCGGA GTTTTCGTCT GTGTCACGGG AGTGTCGGGA
TCCGGAAAAT CTTCTCTCGT CATGGAAACG CTCTATCCGG CGCTGATGAA TCTTCTTCAC
AGAACCAAAC TTCCGGCCGG CGAATTCGAT TCGATCGAAG GTCACGAGAA CATCGATAAG
GTGATCGCGA TAGATCAATC TCCCATTGGA AGAACACCAA GGAGCAACCC GGCCACCTAC
ACCAAGGTGT TCGACGAAAT AAGAAGCCTC TTTGCCATGA CCCCAGCTGC TAAGGCACGT
GGTTACAACA AGAGCAGGTT CAGTTTCAAT CTGAAAGGAG GAAGGTGCGA AGCCTGTCAG
GGTCAGGGTT ACGTGAAGAT AGAGATGCTC TTCCTTCCCG ATGTGTACGT GGAGTGCGAT
GTTTGCAAGG GAAAGAGATA CAACAGAGAA ACACTCGAGA TAACCTACAA AGGAAAGAAC
ATTTCTGATA TACTCGATAT GACGGTGGAT GAAGCACTGG AGTTTTTCAA GAACATTCCC
TCTATAAAGA GAACGCTTCA GGTCTTGCAC GATGTGGGTC TGGGATACGT GAAACTCGGG
CAACCAGCCA CCACCCTCTC CGGTGGTGAG GCGCAGAGGA TAAAGCTCGC GTCCGAGCTG
AGAAAAAGGG ACACGGGGAG AACCCTCTAC ATACTCGACG AGCCAACTGT GGGCCTTCAC
TTTGAAGACG TGAGGAAACT TGTGGAGGTG CTCCACAGAC TGGTAGACAG AGGCAACACC
GTAATCGTGA TAGAACACAA TCTCGACGTC ATAAAGAACG CTGATTACAT CATAGATCTC
GGCCCTGAAG GTGGAAAAGA AGGCGGCTAT ATAGTCGCAG CGGGGACACC CGAGGAAATA
GCGAAGAATC CTCACTCTTA CACCGGAAGA TTCTTGAAGA ACGTGTTATA A
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| Protein sequence | MNEIVVKGAR VHNLKNITVK IPKNKLVVIT GVSGSGKSSL AMDTIYAEGQ RRYLESLSTY
ARQFLGNLKK PDVDEIEGLS PAIAIDQKTV SHNPRSTVGT VTEIYDYLRV LYARIGKAHC
PECGRPLEKK SIDEILQDLF HSFKEGSRIY ILAPVATEKK GTFKKEIEEF ISKGFARIEI
DGEIYRLEEV PELDKNKRHT VKLVVDRLIL ETRNEHRILD SLEVAMREGK GFVEIRNVDT
GESKIFSENL MCPVCGIGFP EITPKLFSFN SPYGACPNCH GLGFTFEVDP SLVIDEEKSV
PEGAIIPYRW DRRLSRWVAR EIERQGVSPH LPFKDLPEDV KEFVLYGDDR FEGVVPKVQR
WHRETESPEM KEWLEKNFIV QRTCSVCGGK RLNREALSVK INGLNIHEFT ELSISEELEF
LKNLNLTERE REIVGELLKE IEKRLEFLVD VGLEYLSLSR SATTLSGGES QRIRLATQIG
SGLTGVIYVL DEPTVGLHPR DTERLIKTLK KLRDLGNTVI VVEHDEEVIR SADYIIDIGP
GGGTNGGRVV FQGTVDELLK NPDSSLTGEY LSGKRKISVN KARRLPYASL KIKGVRHNNL
KNIDVEIPLG VFVCVTGVSG SGKSSLVMET LYPALMNLLH RTKLPAGEFD SIEGHENIDK
VIAIDQSPIG RTPRSNPATY TKVFDEIRSL FAMTPAAKAR GYNKSRFSFN LKGGRCEACQ
GQGYVKIEML FLPDVYVECD VCKGKRYNRE TLEITYKGKN ISDILDMTVD EALEFFKNIP
SIKRTLQVLH DVGLGYVKLG QPATTLSGGE AQRIKLASEL RKRDTGRTLY ILDEPTVGLH
FEDVRKLVEV LHRLVDRGNT VIVIEHNLDV IKNADYIIDL GPEGGKEGGY IVAAGTPEEI
AKNPHSYTGR FLKNVL
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