Gene Tpet_0430 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpet_0430 
Symbol 
ID5170697 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga petrophila RKU-1 
KingdomBacteria 
Replicon accessionNC_009486 
Strand
Start bp415049 
End bp415783 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content47% 
IMG OID640562930 
ProductNAD-dependent deacetylase 
Protein accessionYP_001244030 
Protein GI148269570 
COG category[K] Transcription 
COG ID[COG0846] NAD-dependent protein deacetylases, SIR2 family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones48 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGGAAT TCCTGGATCT TCTCAATGAA TCCAGATTGA CCGTCACTCT CACGGGAGCC 
GGTATCAGTA CCCCAAGCGG CATACCAGAT TTCAGAGGAC CGAATGGGAT ATACAAAAAG
TATTCCCAGA ATGTCTTCGA CATTGATTTC TTCTACTCTC ACCCTGAGGA ATTCTACCAA
TTCGCCAAGG AAGGTATTTT CCCTATGTTA GAAGCAAAAC CGAACCTTGC ACACGTGCTG
CTCGCAAAAC TGGAAGAAAA GGGCCTGATA GAGGCTGTGA TCACACAGAA CATAGACAGA
CTTCACCAGA GAGCGGGCAG TAAAAAAGTG ATAGAGCTAC ACGGAAACGT TGAGGAGTAT
TACTGTGTGA GGTGTGAGAA AAAATACACC GTCGAAGATG TTATAGAGAA ACTCGAATCA
TTGGATGTTC CACGCTGTGA TGACTGCAAC GGTTTGATCA GGCCGAACAT CGTGTTCTTT
GGGGAAAATC TGCCGCAAGA CGCCCTCAGG GAAGCGATCG AACTTTCATC CAAGGCCAGT
TTGATGATCG TCCTGGGATC TTCGCTCGTT GTGTATCCCG CTGCCGAGCT TCCCCTCATA
ACTGTCAGGA GCGGTGGAAA GCTCGTTATC GTGAATTTGG GAGAAACTCC TTTCGATGAT
ATCGCAACTT TGAAGTACAA CATGGACGTT GTCGAGTTCG CCAGAAGAGT GATGGAAGAA
GGAGGTATCT CATGA
 
Protein sequence
MKEFLDLLNE SRLTVTLTGA GISTPSGIPD FRGPNGIYKK YSQNVFDIDF FYSHPEEFYQ 
FAKEGIFPML EAKPNLAHVL LAKLEEKGLI EAVITQNIDR LHQRAGSKKV IELHGNVEEY
YCVRCEKKYT VEDVIEKLES LDVPRCDDCN GLIRPNIVFF GENLPQDALR EAIELSSKAS
LMIVLGSSLV VYPAAELPLI TVRSGGKLVI VNLGETPFDD IATLKYNMDV VEFARRVMEE
GGIS