Gene Tpet_0422 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpet_0422 
Symbol 
ID5171551 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga petrophila RKU-1 
KingdomBacteria 
Replicon accessionNC_009486 
Strand
Start bp408610 
End bp409602 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content48% 
IMG OID640562922 
Productoligopeptide/dipeptide ABC transporter, ATPase subunit 
Protein accessionYP_001244022 
Protein GI148269562 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 
TIGRFAM ID[TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGCAACGC TTCTGGAAGT GAAAAACCTC AGCACGTGGT TTTACATGGA AGAAGGTGTA 
GTCAAAGCCG TGAACGATGT GAACTTCTCG CTGAATTCCA ACGAAGTTCT CGGAATTGTC
GGTGAGACTG GTTCCGGCAA GAGTGTGACA GTGAAATCCA TAATGCGCCT CATAAAGCCT
CCCGGAAAAA TAGTGAGCGG TGAGATCATA TACAAAGGTC AGGATATACT GAAGATACCC
GAAAAAGAAA TGCACAGGAT TCGAGGAAAA GAGATCGCAA TGATCTTTCA GGATCCGATG
ATGTCTCTTA ATCCGCTTTA CACGATAGGA GACCAGCTCA TGGAAACGAT CAGGTATCAT
CTTGGCTACG ACAAGAGAAG AGCCTATCTG AGAGCGGTGG AAATGCTGGA ACTCGTTGGA
ATACCGGAAC CCGAAAAAAG AATGAACAAC TATCCATTCG AATTCTCAGG TGGAATGAGG
CAGAGGGTGG TTATAGCCAT CGCCCTGTCC TGCAATCCCA GTGTGCTCAT AGCGGATGAG
CCCACCACCG CCCTCGATGT GACCATACAG GCACAGATCC TGGAACTCAT GAAAGAACTT
CAAAAAGAGT TCAAAACGGG ACTCATCTTC ATAACACACG ATCTTGGTGT GATCGCTTCC
ATGGCAGACA GGATTATGGT GATGTACGGA GGAAGACAGG TCGAGATAGG AACATCCGAT
CAGATCTTCT ACTCACCCAG ACACCCTTAC ACGAAGATGC TCCTGAGAAG CGTGCCGAGA
GTGGATAAAA GACTTGAAAA GCTCGAGTCC ATACCGGGGC AACCCCCAAG GATGGTCGAC
ATACCACCGG TGTGTCCCTT CTTGCCTCGC TGTCCAAGAA GAGTGGAGAG GTGCTTGAAA
GAATTACCAG AGCTTTCCGA GATAGAAGAA AACCACTACG TCAGATGTTT CAATCCGGTT
GAGGAGGAAG TGAGTCTTGA AAGAAATTCT TGA
 
Protein sequence
MATLLEVKNL STWFYMEEGV VKAVNDVNFS LNSNEVLGIV GETGSGKSVT VKSIMRLIKP 
PGKIVSGEII YKGQDILKIP EKEMHRIRGK EIAMIFQDPM MSLNPLYTIG DQLMETIRYH
LGYDKRRAYL RAVEMLELVG IPEPEKRMNN YPFEFSGGMR QRVVIAIALS CNPSVLIADE
PTTALDVTIQ AQILELMKEL QKEFKTGLIF ITHDLGVIAS MADRIMVMYG GRQVEIGTSD
QIFYSPRHPY TKMLLRSVPR VDKRLEKLES IPGQPPRMVD IPPVCPFLPR CPRRVERCLK
ELPELSEIEE NHYVRCFNPV EEEVSLERNS