Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpet_0420 |
Symbol | |
ID | 5170256 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga petrophila RKU-1 |
Kingdom | Bacteria |
Replicon accession | NC_009486 |
Strand | + |
Start bp | 406958 |
End bp | 408112 |
Gene Length | 1155 bp |
Protein Length | 384 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640562920 |
Product | oligopeptide/dipeptide ABC transporter, ATPase subunit |
Protein accession | YP_001244020 |
Protein GI | 148269560 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.230776 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGCAGGG AAATCCTTAG AGTTGAAAAT CTGGTGAAAC ATTTTCCCAT AAGGGCTGGT GTTTTTAAGA GAATTGTTGG ATGGGTGAAG GCCGTCGATG GTGTCAGCTT CAGCATAAAC GAGGGAGAAA CCTTCGGCCT CGTTGGAGAG TCGGGTTGTG GAAAAACCAC GATTGGAATG ACCCTGCTCA GACTGTACGA GCCAACATCG GGACGCATCA TCGTGGACAA CGAAAACACG ACCTACTACT TCATGCCGCG TTCCAAGGCA AAAAAATACA TAAAGCGCAC CTATCTGAGC AGGTTCGTCA ACATGAAGGA GTCAGATGTG GAAAAACTGG AAGGTGTCGA CAGAGAGTAC GCCCGTATTT TCTTTGAGGA GGCAAAGGGT TCTCCAAAGA AGTTCATGTC CATTCTTCTC GATGATCTAC CGGAGAAAAG GAAAAAATTT CGAAGAGAGA TGCAGATAGT GTTCCAGGAT CCATACAGTT CCCTGAACCC GAGGTTGAGA GTGAAGAGCA TAGTGGGTGA AGGCATCGTC ACACACAGGA TCGCAAGGGG GGAAGAAGTA GAGAAACGAA TCAAAGAAAT CTTGGAGGAT GTGGGTATTC CTTCGGCTTA CGTGTACAGG TTTCCACATG AATTCTCCGG TGGTCAGCGC CAGAGAATCG GAATCGCACG TGCCCTGGCT TTGGAACCCA AACTCGTCGT GGCGGACGAG GCCGTCGCTG CTCTGGACGT CTCGATAAGA AGTCAGATCA TAAACCTCAT GGAAGATCTT CAGAGGGAAC ACAAACTCAC GTACATTTTC ATTTCGCACG ATCTGGCTGT TGTAAAGCAC ATAAGCGATA GAATAGGTGT GATGTATCTT GGAAAGATGG TGGAACTTGC TCCTAAAAAA GACTTGTTCG AAAAACCGCT CCACCCTTAC ACTGTAGCTC TCATGTCTGC GATACCGGTA CCTGATCCAA CAAAGAAGAG GGAAAGAATC ATTCTCAAAG GAGATGTTCC GAGCCCTATA AATCCGCCGT CTGGCTGTAG ATTCCACACA AGATGTCCCA TAGCGAAAGA GATTTGCTCC AAGGAAGAAC CGGCTTTTCG AGAGGTTGAA GAGGGACACT TCGTCGCCTG TCACTTCCCG GGTGAGCTGA GGTGA
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Protein sequence | MSREILRVEN LVKHFPIRAG VFKRIVGWVK AVDGVSFSIN EGETFGLVGE SGCGKTTIGM TLLRLYEPTS GRIIVDNENT TYYFMPRSKA KKYIKRTYLS RFVNMKESDV EKLEGVDREY ARIFFEEAKG SPKKFMSILL DDLPEKRKKF RREMQIVFQD PYSSLNPRLR VKSIVGEGIV THRIARGEEV EKRIKEILED VGIPSAYVYR FPHEFSGGQR QRIGIARALA LEPKLVVADE AVAALDVSIR SQIINLMEDL QREHKLTYIF ISHDLAVVKH ISDRIGVMYL GKMVELAPKK DLFEKPLHPY TVALMSAIPV PDPTKKRERI ILKGDVPSPI NPPSGCRFHT RCPIAKEICS KEEPAFREVE EGHFVACHFP GELR
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