Gene Tpet_0419 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpet_0419 
Symbol 
ID5170349 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga petrophila RKU-1 
KingdomBacteria 
Replicon accessionNC_009486 
Strand+ 
Start bp405950 
End bp406954 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content48% 
IMG OID640562919 
Productoligopeptide/dipeptide ABC transporter, ATPase subunit 
Protein accessionYP_001244019 
Protein GI148269559 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 
TIGRFAM ID[TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0195088 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGACAGAGC CTCTGCTTAG GGTGGAAAAT CTGAAAACCT ATTTCTATAC AGAAGACGGT 
GTGGTGAAGG CGGTCGATGG TGTTTCTTTT GAGGTCAGAG AGGGAGAAAC CCTGGGCATC 
GTTGGGGAAT CCGGAAGTGG AAAAAGTGTG ACATCGCTCT CAATAATGAG ACTCCTGGAT 
CAGAACGGAA AGATAGTTGA TGGAAAGATC ATCTTCAAAG GAAGGAATCT TCTCGAACTT 
TCAGAGAGCG AAATGAGGAA GATCAGAGGA AAAGAGATCG CCATGATATT TCAAGAACCC 
ATGGTGGCTT TGAACCCTGT TTTCACGATA GGGGATCAGA TAATGGAGGC AATAATTCTT 
CACCAGAACG TCTCTGAAAA AGAAGCGAGA AAAATGGCTA TAGATCTTCT CAGAAAAGTG 
GGAATTCCCG AACCTGAAAA GAGAGTGGAT GAGTACCCCC ACCAGCTCTC CGGTGGGATG 
AGACAGAGGG CTATGATAGC CATGGCACTC TCCTGCAGAC CGAGTCTTCT CATAGCGGAC 
GAACCCACCA CCGCTCTCGA CGTGACCATA CAGGCTCAGA TCCTGGAGCT CATGAAGGAA 
CTCCAGAAAG AATACGGAAT GGCAATCATT CTGATCACCC ACGATATGGG CGTCGTTGCG 
GAAATGTCCG ATAAAGTTGC TGTCATGTAC GCGGGAAAGG TGGTCGAGTA CGGAGACGTG 
AAAACCATCT TCACCGAACC CAAGCACCCC TACACCTATG CTCTTCTCGA ATCCATTCCC 
AGAATAGACG TAGAACAGGA GAGACTGAAG AGCATTCCGG GAAACGTACC CGACCCGCTC 
AACTTCCCTC CGGGATGTAA ATTCCATCCC AGATGTGAAT TCTTCGAAAA AGGAAAATGC 
GACGTTGAAG AACCTGAACT GGAAGACCTG GATGGCAATC ACAAGGTGAG GTGTTTCTTC 
TGGCAAAAAC TCGATGAAAT GAGACATGCA AAAAGCGAGG TGTGA
 
Protein sequence
MTEPLLRVEN LKTYFYTEDG VVKAVDGVSF EVREGETLGI VGESGSGKSV TSLSIMRLLD 
QNGKIVDGKI IFKGRNLLEL SESEMRKIRG KEIAMIFQEP MVALNPVFTI GDQIMEAIIL 
HQNVSEKEAR KMAIDLLRKV GIPEPEKRVD EYPHQLSGGM RQRAMIAMAL SCRPSLLIAD 
EPTTALDVTI QAQILELMKE LQKEYGMAII LITHDMGVVA EMSDKVAVMY AGKVVEYGDV 
KTIFTEPKHP YTYALLESIP RIDVEQERLK SIPGNVPDPL NFPPGCKFHP RCEFFEKGKC 
DVEEPELEDL DGNHKVRCFF WQKLDEMRHA KSEV