Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpet_0415 |
Symbol | groEL |
ID | 5170646 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga petrophila RKU-1 |
Kingdom | Bacteria |
Replicon accession | NC_009486 |
Strand | - |
Start bp | 401348 |
End bp | 402964 |
Gene Length | 1617 bp |
Protein Length | 538 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640562914 |
Product | chaperonin GroEL |
Protein accession | YP_001244015 |
Protein GI | 148269555 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0459] Chaperonin GroEL (HSP60 family) |
TIGRFAM ID | [TIGR02348] chaperonin GroL |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0000000808798 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGAAGA TTCTGAAGTT CAATGAAGAA GCGAGAAGGG CACTCGAAAG AGGTGTGGAC AAGGTTGCTA ACGCGGTAAA GGTGACTCTC GGACCGAAGG GAAGGAACGT TGTTATCGAA AAATCGTGGG GTTCTCCAAC AATAACCAAC GACGGTGTTT CCATAGCCAA GGAGATTGAG CTCGAGGACA AATTCGAAAA CCTCGGGGCT CAGCTCGTGA AAGAAGTTGC TTCCAAAACA AACGACGTTG CCGGTGATGG TACAACAACT GCTACGGTTC TCGCACAGGC TATGATCAAA GAAGGTCTCA AGAACGTTGC AGCGGGCGCC AATCCAATTC TCCTCAAGAG GGGTATAGAC AAAGCCGTTG AGAAAGCCGT TGAAGAGATC AAGAAGGTCT CCAAGAAACT TTCCGGTAGG GAGGACATTG CCCACGTTGC CGCTATATCT GCGAACAGCG CCGAAATAGG AGAGCTCATC GCAGAAGCTA TGGACAAGGT AGGAGAAGAC GGGGTCATCA CTGTGGAAGA TTCCAAAACA CTCGAAACCT ACGTTGAATT CACCGAAGGT ATGCAGTTTG ACAGAGGTTA CATCTCACCA TACTTCGTCA CGGATGCCGA GAAGATGGAG GTCGTTCTGA AGGAACCCTT CATACTCATC ACTGACAGGA AACTCAGCGC TGTGAAACCT CTCATTCCGA TCCTTGAAAA GGTCGCTCAG ACCGGAAGAC CACTTCTCGT TATAGCGGAA GACGTTGAAG GAGAAGTTCT GACAACACTT GTTCTCAACA AACTCAAGGG TACTCTCCAG TCCTGTGCCG TGAAGGCTCC TGGATTCGGT GAAAGAAGAA AAGCCATGCT TCAGGACATA GCAATTCTCA CCGGAGGTCA GGTGGCAAGT GAAGAGCTCG GAATCAATCT CGAAGATCTC ACCCTTGAAG ATCTCGGAAG AGCCGATCTT GTGAGGGTCA AGAAAGATGA AACCATCATA ATTGGAGGAA AAGGTGATCC AGAGGCTATC AAGAAGAGAA TCGCTCAAAT CAAAGCCCAG ATAGAGGAAA CCACATCTGA GTACGAAAAA GAAACTCTCC AGGAAAGGAT GGCAAAACTC GCAGGAGGAG TAGCCGTCAT AAAGGTTGGA GCGGCCACCG AAACAGAGCT CAAGGAAAAG AAACACAGAA TTGAAGACGC ACTGAGCGCT ACAAGAGCAG CCGTTGAAGA AGGTATCGTT CCCGGTGGAG GAGTAACACT CCTGAGAGCA AGAAAGGCCG TTGAAAAGGT CATAGAAGAG CTCGAAGGCG ACGAGAAGAT AGGAGCACAG ATCGTTTACA AGGCACTCTC AGCCCCCATT AAGCAGATTG CTGAAAACGC AGGATACGAC GGAGCGGTGA TCATAGAGAA GATACTCTCG AATGACGATC CAGCCTATGG ATTCGACGCA CTCAGGGGAG AATACTGCAA CATGTTTGAA AGAGGAATCA TTGACCCAGC AAAGGTTACA AGGAGCGCCC TGCAGAACGC CGCGTCCATC GCTGGAATGC TCCTGACAAC GGAAGTGCTC ATCGTTGAAA AACCCGAGGA GAAAAAAGAA ACACCGAGTA TTCCTGAAGA ATTCTAA
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Protein sequence | MPKILKFNEE ARRALERGVD KVANAVKVTL GPKGRNVVIE KSWGSPTITN DGVSIAKEIE LEDKFENLGA QLVKEVASKT NDVAGDGTTT ATVLAQAMIK EGLKNVAAGA NPILLKRGID KAVEKAVEEI KKVSKKLSGR EDIAHVAAIS ANSAEIGELI AEAMDKVGED GVITVEDSKT LETYVEFTEG MQFDRGYISP YFVTDAEKME VVLKEPFILI TDRKLSAVKP LIPILEKVAQ TGRPLLVIAE DVEGEVLTTL VLNKLKGTLQ SCAVKAPGFG ERRKAMLQDI AILTGGQVAS EELGINLEDL TLEDLGRADL VRVKKDETII IGGKGDPEAI KKRIAQIKAQ IEETTSEYEK ETLQERMAKL AGGVAVIKVG AATETELKEK KHRIEDALSA TRAAVEEGIV PGGGVTLLRA RKAVEKVIEE LEGDEKIGAQ IVYKALSAPI KQIAENAGYD GAVIIEKILS NDDPAYGFDA LRGEYCNMFE RGIIDPAKVT RSALQNAASI AGMLLTTEVL IVEKPEEKKE TPSIPEEF
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